Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25e13
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 32 0.44
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 32 0.44
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 32 0.44
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 32 0.44
Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta p... 30 1.4
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 30 1.4
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 30 1.8
Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 27 9.6
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 378 SDSDITVLRMKKCLTNDALKRNDG---NPGDGFHQPDTSSMVNLATLIKQSRTPSKHSIN 548
S ++ ++ +++ L KRN+G PG D + MVNL T+ ++ ++ S+
Sbjct: 319 SIQNLELIELREKLKEKVEKRNEGMAYRPGGELPHEDKAVMVNLETITPSTKKDAEVSVG 378
Query: 549 MEEYLLPLTSWEKVDQENKPCDLENDKINNPFNP 650
+SW ++ + PC+ +I+ P +P
Sbjct: 379 --------SSW--TEEYSSPCESPVPRISEPASP 402
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 378 SDSDITVLRMKKCLTNDALKRNDG---NPGDGFHQPDTSSMVNLATLIKQSRTPSKHSIN 548
S ++ ++ +++ L KRN+G PG D + MVNL T+ ++ ++ S+
Sbjct: 353 SIQNLELIELREKLKEKVEKRNEGMAYRPGGELPHEDKAVMVNLETITPSTKKDAEVSVG 412
Query: 549 MEEYLLPLTSWEKVDQENKPCDLENDKINNPFNP 650
+SW ++ + PC+ +I+ P +P
Sbjct: 413 --------SSW--TEEYSSPCESPVPRISEPASP 436
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 378 SDSDITVLRMKKCLTNDALKRNDG---NPGDGFHQPDTSSMVNLATLIKQSRTPSKHSIN 548
S ++ ++ +++ L KRN+G PG D + MVNL T+ ++ ++ S+
Sbjct: 450 SIQNLELIELREKLKEKVEKRNEGMAYRPGGELPHEDKAVMVNLETITPSTKKDAEVSVG 509
Query: 549 MEEYLLPLTSWEKVDQENKPCDLENDKINNPFNP 650
+SW ++ + PC+ +I+ P +P
Sbjct: 510 --------SSW--TEEYSSPCESPVPRISEPASP 533
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 378 SDSDITVLRMKKCLTNDALKRNDG---NPGDGFHQPDTSSMVNLATLIKQSRTPSKHSIN 548
S ++ ++ +++ L KRN+G PG D + MVNL T+ ++ ++ S+
Sbjct: 513 SIQNLELIELREKLKEKVEKRNEGMAYRPGGELPHEDKAVMVNLETITPSTKKDAEVSVG 572
Query: 549 MEEYLLPLTSWEKVDQENKPCDLENDKINNPFNP 650
+SW ++ + PC+ +I+ P +P
Sbjct: 573 --------SSW--TEEYSSPCESPVPRISEPASP 596
>Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical
protein F11C1.6b protein.
Length = 492
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 474 PDTSSMVNLATLIKQSRTPSKHSINM---EEYLLPLTSWEKVDQENKPCDLENDKI--NN 638
PD + + + T +K + P KH+ ++ EE L + W K DQ L++ I
Sbjct: 248 PDDAQIARIFTSVKGTSKPEKHAFSIQVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQT 307
Query: 639 PFNPKHDLKIYNA 677
+ H + I NA
Sbjct: 308 SWTTVHIVDITNA 320
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 474 PDTSSMVNLATLIKQSRTPSKHSINM---EEYLLPLTSWEKVDQENKPCDLENDKI--NN 638
PD + + + T +K + P KH+ ++ EE L + W K DQ L++ I
Sbjct: 328 PDDAQIARIFTSVKGTSKPEKHAFSIQVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQT 387
Query: 639 PFNPKHDLKIYNA 677
+ H + I NA
Sbjct: 388 SWTTVHIVDITNA 400
>AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta
protein.
Length = 492
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 474 PDTSSMVNLATLIKQSRTPSKHSINM---EEYLLPLTSWEKVDQENKPCDLENDKI--NN 638
PD + + + T +K + P KH+ ++ EE L + W K DQ L++ I
Sbjct: 248 PDDAQIARIFTSVKGTSKPEKHAFSIQVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQT 307
Query: 639 PFNPKHDLKIYNA 677
+ H + I NA
Sbjct: 308 SWTTVHIVDITNA 320
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 474 PDTSSMVNLATLIKQSRTPSKHSINM---EEYLLPLTSWEKVDQENKPCDLENDKI--NN 638
PD + + + T +K + P KH+ ++ EE L + W K DQ L++ I
Sbjct: 324 PDDAQIARIFTSVKGTSKPEKHAFSIQVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQT 383
Query: 639 PFNPKHDLKIYNA 677
+ H + I NA
Sbjct: 384 SWTTVHIVDITNA 396
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 498 LATLIKQSRTPSKHSINMEEYLLPLTSWEK-VDQENKPCDLENDKINNPFNPKHDLKI 668
+ T +TP+ H I M + + WEK +D N+P L ++++++ F P + + +
Sbjct: 368 IGTAAMGMKTPAPHMIPMTPEQMQIYRWEKEIDDRNRP--LTDEELDSLFPPGYKVLV 423
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 498 LATLIKQSRTPSKHSINMEEYLLPLTSWEK-VDQENKPCDLENDKINNPFNPKHDLKI 668
+ T +TP+ H I M + + WEK +D N+P L ++++++ F P + + +
Sbjct: 368 IGTAAMGMKTPAPHMIPMTPEQMQIYRWEKEIDDRNRP--LTDEELDSLFPPGYKVLV 423
>Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical
protein T05D4.3 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -2
Query: 553 SMLILCFEGVLDCFISVAKLTIDEVSGWWKPSPGFPSFLFRASLVKHFFILNTVIS 386
+M L + L I I G+W P FPSFL R++ + H F + VI+
Sbjct: 186 AMRSLSIQNALSTIIPAFFQIISSFFGFW---PMFPSFLRRSAQLLHIFFNSVVIT 238
>Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical
protein C18E9.7 protein.
Length = 855
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 441 NDGNPGDGFHQPDTSSMVNLATLIKQSRTPSKHSINMEEYLLPLTSWEKVDQEN 602
N G+ G+ +T+ +V+L +IK+ PS+ ++ E +L L WE + N
Sbjct: 265 NSGDLGEDHPSENTNVLVDLPEMIKEYGEPSEIWLSDENEMLRL-DWEAPENAN 317
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical protein
C05D12.3c protein.
Length = 1001
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1
Query: 497 INHR*SIWLVETIPRISIISFQS--IVGQALFHS*YGYI*--IAWPRNNIRQWTLTAFQS 330
+N++ I LV+T IS+Q+ I+ + Y YI I PRN++ W LT++
Sbjct: 867 LNYQLEIQLVDTSRYDQPISYQNTTILSRDSSTCSYNYITPQITIPRNDVTSWILTSYDD 926
Query: 329 FFNFLFTSSAFQF 291
N + + +
Sbjct: 927 ENNLILRRIVYYY 939
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical protein
C05D12.3a protein.
Length = 1039
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1
Query: 497 INHR*SIWLVETIPRISIISFQS--IVGQALFHS*YGYI*--IAWPRNNIRQWTLTAFQS 330
+N++ I LV+T IS+Q+ I+ + Y YI I PRN++ W LT++
Sbjct: 867 LNYQLEIQLVDTSRYDQPISYQNTTILSRDSSTCSYNYITPQITIPRNDVTSWILTSYDD 926
Query: 329 FFNFLFTSSAFQF 291
N + + +
Sbjct: 927 ENNLILRRIVYYY 939
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,763,034
Number of Sequences: 27780
Number of extensions: 297691
Number of successful extensions: 875
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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