Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25e12
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.039
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 33 0.052
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.21
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.28
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 29 0.48
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 29 0.64
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 29 0.85
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 28 1.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.5
SPAC343.14c |||translation initiation factor eIF2B|Schizosacchar... 27 2.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 27 2.6
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 3.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.4
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 3.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 4.5
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.0
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 7.9
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 25 7.9
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 25 7.9
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 25 7.9
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.1 bits (72), Expect = 0.039
Identities = 19/57 (33%), Positives = 37/57 (64%)
Frame = +3
Query: 528 TSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
+S+PS+ + S+ F++ PTSTS+ SS+S+ S+ +S + ++ + SSS ++S
Sbjct: 184 SSQPSVSSTSSSTFSSA--APTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTS 238
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 588 PTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
PTSTS+ + SS+S +S+ TS + ++ +SSS+ SS
Sbjct: 283 PTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSS 319
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +3
Query: 591 TSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
+ST++ KSS+S +S ++S + ++ + SSS++SS
Sbjct: 356 SSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSS 391
Score = 27.1 bits (57), Expect = 2.6
Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 288 STGTYSAMDASS-STC*IGLEANVHLSTQTGPSGLVESLEMVRRGIILEQAANQRPLKGI 464
ST + S +D SS S+ + +V +S + + L + ++ +P
Sbjct: 132 STESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSS 191
Query: 465 LNAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPT-STSAMVKSSASLASNI 641
++++ A ST + L +S S + PS+ ++ + STS++ +S+S +S
Sbjct: 192 TSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
Query: 642 TSCTDIRTTPMNSSSNASS 698
+S + ++ SSS++SS
Sbjct: 252 SSLSSSSSSSTASSSSSSS 270
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.7 bits (71), Expect = 0.052
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 468 NAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVKS--SASLASNI 641
N +SA + S+ LTS S+ + S+ +T PTS+S S S+SLAS+
Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLAS--SSTNSTTSASPTSSSLTSSSATSSSLASSS 123
Query: 642 TSCTDIRTTPMNSSSNASS 698
T+ + + ++ + SSS ASS
Sbjct: 124 TTSSSLASSSITSSSLASS 142
Score = 29.1 bits (62), Expect = 0.64
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +3
Query: 435 AANQRPLKGILNAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVK 614
+A+ PL + N+ +A A ST +T + TS S + P T + TSTS
Sbjct: 353 SASSTPLTSV-NSTTATSAS--STPLTSVNSTSATSASSTP----LTSANSTTSTSVSST 405
Query: 615 SSASLASNITSCTDIRTTPMNSSSNASS 698
+ + S++ + + +TP++S+++ ++
Sbjct: 406 APSYNTSSVLPTSSVSSTPLSSANSTTA 433
Score = 29.1 bits (62), Expect = 0.64
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +3
Query: 435 AANQRPLKGILNAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVK 614
+A+ PL + N+ +A A ST +T + TS S + P T + TSTS
Sbjct: 467 SASSTPLTSV-NSTTATSAS--STPLTSVNSTSATSASSTP----LTSANSTTSTSVSST 519
Query: 615 SSASLASNITSCTDIRTTPMNSSSNASS 698
+ + S++ + + +TP++S+++ ++
Sbjct: 520 APSYNTSSVLPTSSVSSTPLSSANSTTA 547
Score = 28.7 bits (61), Expect = 0.85
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = +3
Query: 288 STGTYSAMDASSSTC*IGLEANVHLSTQTGPSGLVESLEMVRRGIILEQAANQRPLKGIL 467
S+ T S+ +SS T L ++ ST + S S + A+ L
Sbjct: 73 SSLTSSSAASSSLTSSSSLASS---STNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL 129
Query: 468 NAASALDAFK*STRITKLKL--TSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNI 641
++S + S+ IT L +S S S+ +T PTS++ S++ ASN
Sbjct: 130 ASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNS 189
Query: 642 TSCTDIRTTPMNSSSNASS 698
+ + + ++ +NS+++A++
Sbjct: 190 ATSSSLASSSLNSTTSATA 208
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 588 PTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
PTSTS+ +S+ L + TSCT + P SS+ S+
Sbjct: 209 PTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 501 STRITKLKLTSRPSIVTVP--SAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPM 674
ST I ++ P TVP S + P STS+ SS+ L S TSCT + P
Sbjct: 288 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPP 347
Query: 675 NSSS 686
+S
Sbjct: 348 TGNS 351
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 501 STRITKLKLTSRPSIVTVP--SAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPM 674
ST I ++ P TVP S + P STS+ SS+ L S TSCT + P
Sbjct: 342 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPP 401
Query: 675 NSSS 686
+S
Sbjct: 402 TGNS 405
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 588 PTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
PTSTS+ +S L + TSCT + P S++ S
Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLS 188
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 588 PTSTSAMVKSSASLASNITSCTDIRTTPMNSSS 686
PTSTS+ +S+ L + TSCT + P +S
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNS 297
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 504 TRITKLKLTS--RPSIV-TVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPM 674
T T + LTS R S T ++I + TS+++ S+S SN+T+ + +TP
Sbjct: 634 TSSTSIPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPP 693
Query: 675 NSSSNASS 698
++S S+
Sbjct: 694 PTTSFPST 701
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.28
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 528 TSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
T+ S + PS+ T P+S+S+ SS+S +S+ +S + ++ +SSS++SS
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 191
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 591 TSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
+S+ + SS+S +S +S T T+P +SSS++SS
Sbjct: 129 SSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSS 164
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 591 TSTSAMVKSSASLASNITSCTDIRT---TPMNSSSNASS 698
+S+S+ SS+S + ++S T I T TP +SSS+ SS
Sbjct: 228 SSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSS 266
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +3
Query: 525 LTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
L + S +V S ++ P+S+S +S S +S+ +S + ++ +SSS++SS
Sbjct: 123 LQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSS 180
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 29.5 bits (63), Expect = 0.48
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 363 STQTGPSGL-VESLEMVRRGIILEQAANQRPLKGILNAASALDAFK*STRITKLKLTSRP 539
S+ T PS + S +V R A KG+ NAAS+ +F S I+K TSR
Sbjct: 589 SSPTKPSTTSLRSQSLVNRFASSTLKAPSSSSKGVSNAASSKQSFPSSPSISKKLETSRL 648
Query: 540 SIVTVP-SAIFATRFHRPTSTSAMVKSSASLASNITSCT 653
S +P S + A + +KS N+ + T
Sbjct: 649 STKKLPGSTMKAASALKEYPQQQSMKSGGEKQDNLVTIT 687
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 479 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSN--IHICYGQVFCEPC 631
C +C + + +++ + +HS C KC C+ PSS Q+FC+ C
Sbjct: 24 CIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSSEDFSQDDQKQIFCKLC 78
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 28.7 bits (61), Expect = 0.85
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 26 KTVKTKYFFIFKHCCFRYYSNFIS 97
K V+T+YFF + C Y NF++
Sbjct: 337 KNVQTEYFFCYVGICIGVYGNFVA 360
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 617 FCEPCFQHHVLHRHKDNPN 673
FC PC + LH HKDNPN
Sbjct: 17 FCGPCRR---LHYHKDNPN 32
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 1.5
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +3
Query: 462 ILNAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNI 641
IL + A S +T + +TS S T S A T+ S+ + S S A+ +
Sbjct: 201 ILTTSVNSPAVSSSETLTSVSITSTESAYTSSSVDIAAS----TTASSTLPVSTSEAT-V 255
Query: 642 TSCTDIRTTPMNSSSNASS 698
+ TDI TP SS ASS
Sbjct: 256 SFSTDIPATPSTLSSPASS 274
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 450 PLKGILNAASALDAFK*STRITKLK-LTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSAS 626
P+ +L+++S++ S + + ++S S ++PS + +STS+ +S S
Sbjct: 534 PMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLS 593
Query: 627 LASNITSCTDIRTTPMNSSSNASS 698
++S+ TS T + + SS +SS
Sbjct: 594 ISSSSTSSTFSSASTSSPSSISSS 617
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 528 TSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
++R TV S +T +PT++ A SS S+ S+ +S +TP++SSS+ASS
Sbjct: 441 STRVQTTTVSS--ISTSVKQPTASVA--SSSVSVPSS-SSVQPQSSTPISSSSSASS 492
>SPAC343.14c |||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 101 HTYPKKSSLIMDKGQEQVKKPF 166
HTYP SSLI D +V+ PF
Sbjct: 8 HTYPAVSSLIADLKSRKVQGPF 29
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 2.6
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 465 LNAASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNIT 644
++ +SA + K S+ + +S S S + H TSTS V +S S S T
Sbjct: 522 VHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGS--STST 579
Query: 645 SCTDIRTTPMNSSSNASS 698
S + +T +SSS++SS
Sbjct: 580 SSVAVTSTAYSSSSSSSS 597
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 419 DNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA 538
D+P +S E+ EG+ + S+ S +++++ E +KQA
Sbjct: 557 DSPNVASGVESDEGSEEISLDSEYSDILSDDGDFEKEKQA 596
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 591 TSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
TS+S+ SS ++S+ITS + SSS+ASS
Sbjct: 155 TSSSSSSSSSTPISSSITSSISSSASSSVSSSSASS 190
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 549 TVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNAS 695
T+ I+++ TS+S SS+S S+ +S + +TP++SS +S
Sbjct: 128 TISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSS--STPISSSITSS 174
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.4
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Frame = +3
Query: 288 STGTYSAMDASSSTC*IGLEANVHLSTQTGPSGLVESLEMVRRGIILEQAANQRPLKGIL 467
ST S+ +SST I V+ ST S +V S + +L ++ +L
Sbjct: 2781 STPITSSSVLNSSTP-ITSSTVVNTSTPITSSTVVNSSTPITSSTVLN-SSTPITSSSVL 2838
Query: 468 NAASALD---AFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASN 638
N+++ + A ST IT + + + +T +A+ TSTS S + ++
Sbjct: 2839 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTAL-------NTSTSITSSSVLNSSTP 2891
Query: 639 ITSCTDIRT-TPMNSSSNASS 698
ITS T + T TP+ SSS +S
Sbjct: 2892 ITSSTVVNTSTPITSSSVLNS 2912
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.6 bits (56), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 477 SALDAFK*STRITKLKLTSRPSIVTVPSAIFATRFHRPT-STSAMVKSSASLASNITSCT 653
S L +++ RI L P IVT P + F PT ST + S S + +S +
Sbjct: 478 STLPSYEDVARIEHLSRPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSS 537
Query: 654 DIRTTPMNSSSN 689
I +P +SS++
Sbjct: 538 GI--SPSHSSAS 547
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 537 PSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNAS 695
PSI+T+ S + + PT+T+ SS+S S+ +S TP++SS ++S
Sbjct: 182 PSIITLVSTSYVSEVVTPTTTNNW-NSSSSFTSSTSS------TPISSSYSSS 227
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 609 VKSSASLASNITSCTDIRTTP-MNSSSNASS 698
V+S++S A N+ TDI+ TP ++ S N +S
Sbjct: 461 VRSASSAALNLPRDTDIKATPNLSQSGNINS 491
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 549 TVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
+ PS+ ++ P+S+S+ KSS+S S+ +S + +++ +SSS+ SS
Sbjct: 152 STPSSSSSSSSSSPSSSSS--KSSSSSKSSSSSSSSSKSSSSSSSSSKSS 199
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 588 PTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
PTS+S++ SS ++++++ +TP SS+ ASS
Sbjct: 220 PTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASS 256
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 504 TRITKLKLTSRPS---IVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPM 674
T + ++K T PS PSA PT+ + + + AS S IR
Sbjct: 521 TPLPRVKNTQNPSRSISAEPPSATSTANRRHPTANRIDINARLNSASRSRSANMIRQGAN 580
Query: 675 NSSSNASS 698
S SN SS
Sbjct: 581 GSDSNMSS 588
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 404 NGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENN 514
+G + D+ ASS+S AS G RSV R + E++
Sbjct: 517 DGADNDDSSASSESFASAGAHSRSVFPRRSNVSEESH 553
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 24 QKPSKRNIFSF-SNIAVFVTIQILFQYIP-TQKSQV*LWI 137
Q PS R SN+ F++IQ L +Y+P T +V WI
Sbjct: 113 QAPSDRTWSRMVSNLFAFISIQFLNRYLPNTTAVKVVSWI 152
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 525 LTSRPSIVTVPSAIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMNSSSNASS 698
L S P T S + FH+P+ST A S++ S + + +S SN S+
Sbjct: 16 LHSPPESHTFSSQTDDSYFHKPSSTGLFATLVADTNSSVPSASRSPESIASSQSNDSA 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,934,088
Number of Sequences: 5004
Number of extensions: 62132
Number of successful extensions: 278
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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