Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25e11
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 191 3e-48
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 191 3e-48
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 191 3e-48
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 191 3e-48
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 191 3e-48
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 184 2e-46
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 184 2e-46
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 184 2e-46
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 184 2e-46
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 184 2e-46
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 184 2e-46
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 161 2e-39
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 149 8e-36
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 100 2e-25
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 110 4e-24
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 92 2e-18
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 50 1e-05
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 30 7.6
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 30 7.6
BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein. 30 7.6
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 30 7.6
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (465), Expect = 3e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 146 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 325
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 326 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 505
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 506 -------AAPKPL---EEDDEVPNLVGNFDEASK 577
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 191 bits (465), Expect = 3e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 146 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 325
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 326 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 505
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 506 -------AAPKPL---EEDDEVPNLVGNFDEASK 577
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (465), Expect = 3e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 146 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 325
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 326 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 505
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 506 -------AAPKPL---EEDDEVPNLVGNFDEASK 577
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 191 bits (465), Expect = 3e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 146 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 325
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 326 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 505
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 506 -------AAPKPL---EEDDEVPNLVGNFDEASK 577
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 191 bits (465), Expect = 3e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 146 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 325
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 326 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 505
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 506 -------AAPKPL---EEDDEVPNLVGNFDEASK 577
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 104
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 105 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 164
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 165 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 202
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 184 bits (449), Expect = 2e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 577
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 161 bits (392), Expect = 2e-39
Identities = 87/137 (63%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
Frame = +2
Query: 197 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 376
+GT RRKKKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 377 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV-------AAPKPL---E 526
L+ANTFAITGH E K TEMLPGILSQLG D L L+++A APKP E
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 527 EDDEVPNLVGNFDEASK 577
EDD+VP+LV NFDEASK
Sbjct: 133 EDDDVPDLVENFDEASK 149
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 149 bits (362), Expect = 8e-36
Identities = 80/147 (54%), Positives = 92/147 (62%)
Frame = +2
Query: 128 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 307
T +++ KL KLQ+QVRIGGKGT RKKKV H TA DD VN I GI
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGI 89
Query: 308 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 487
E+VNM GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L+
Sbjct: 90 EKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLR 149
Query: 488 RIASSVAAPKPLEEDDEVPNLVGNFDE 568
R+A V +P+ D + P G D+
Sbjct: 150 RLA-EVLPKQPV--DGKAPLATGGDDD 173
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 100 bits (239), Expect(2) = 2e-25
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Frame = +2
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 490
+VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 491 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 568
+A SV PL ++DDEVP G F E
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 35.9 bits (79), Expect(2) = 2e-25
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGK 199
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 110 bits (265), Expect = 4e-24
Identities = 61/106 (57%), Positives = 69/106 (65%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN +KL K Q++V G KGT RKK VVH TA +D VN IPGIE
Sbjct: 1 MKETIMN-QKLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIE 56
Query: 311 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGI 448
EVNM GTVIHFNNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 57 EVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 92.3 bits (219), Expect = 2e-18
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
Frame = +2
Query: 314 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 493
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 494 A-----SSVAAPKPL-----EEDDEVPNLVGNFDEASK 577
A SV PL ++DDEVP ++ NFDEASK
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDEASK 98
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 49.6 bits (113), Expect = 1e-05
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 131 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 310
+K + MN EKL KLQ++V IGG +KKVVH TA +D ++ GIE
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIE 54
Query: 311 EVNMIKEDGTVI 346
EVNM TVI
Sbjct: 55 EVNMFTNQATVI 66
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 467 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 580
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 467 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 580
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein.
Length = 166
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 467 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 580
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 467 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 580
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 131 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,769,465
Number of Sequences: 237096
Number of extensions: 1811269
Number of successful extensions: 7634
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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