Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25e06
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 48 7e-06
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 46 2e-05
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 46 3e-05
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 45 7e-05
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 42 4e-04
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 41 0.001
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 38 0.006
07_03_0683 + 20671067-20671951,20672030-20672203 36 0.042
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468... 33 0.30
07_03_1089 - 23879483-23881909 30 1.6
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 29 4.9
09_02_0551 - 10519674-10519883,10519960-10520148 28 6.4
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 28 6.4
03_01_0436 + 3384526-3385236,3387857-3388720 28 6.4
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 28 8.5
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 8.5
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 28 8.5
01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356 28 8.5
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 48.0 bits (109), Expect = 7e-06
Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +3
Query: 336 KGLNAP-LPEYDYIIVGAGSAGCVLASRLTEDPKVTVLLLE-VGKP--EMLLTDVPSVAP 503
+ + AP + YDYII+G G+AGC LA+ L+E + VLLLE G P + + ++ A
Sbjct: 33 EAVEAPVMAYYDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFAD 90
Query: 504 YFQNTDYAWPYYMEPQPGVCLGMINKRCYWPRGRAIGGTSVINYMIYTRGRPE-----EW 668
+T A P G+IN R R +GG S IN +TR P W
Sbjct: 91 VLADTSGASPSQRFVSED---GVIN-----ARPRVLGGGSCINAGFFTRAGPGYVRALGW 142
Query: 669 DRIEAAGNYGW 701
D E Y W
Sbjct: 143 DPKEVVSAYQW 153
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +3
Query: 345 NAPL-PEYDYIIVGAGSAGCVLASRLTEDPKVTVLLLEVGKPEMLLTDVPSVAPYFQNTD 521
+APL Y+YI++G G+AGC LA+ L+E +V +LL G P ++ +T
Sbjct: 47 DAPLVSSYNYIVIGGGTAGCPLAATLSEHSRV-LLLERGGLPYANMSSEQHFTDALADTS 105
Query: 522 YAWPYYMEPQPGVCLGMINKRCYWPRGRAIGGTSVINYMIYTRG-----RPEEWDRIEAA 686
A P G++N R R +GG S +N YTR R WD
Sbjct: 106 PASPAQRFISED---GVVN-----ARARVLGGGSCLNAGFYTRASNEYVRASGWDARLVN 157
Query: 687 GNYGW 701
+Y W
Sbjct: 158 SSYRW 162
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = +3
Query: 363 YDYIIVGAGSAGCVLASRLTEDPKVTVLLLEVGKPEMLLTDVPSVAPYFQNTDYAWPYYM 542
YDYI+VG G+AGC LA+ L VL+LE G + + + + A P
Sbjct: 55 YDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTLAMADPAPE 114
Query: 543 EPQPGVCLGMINKRCYWPRGRAIGGTSVINYMIYTRGRPEEWDRIEAAGN--YGWSYK 710
P R R +GG + IN Y+R P +W R G W K
Sbjct: 115 SDAPAQTFAS-EDGVPNVRARVLGGATSINAGFYSRAHP-DWFRSHGEGGEAMNWDMK 170
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 44.8 bits (101), Expect = 7e-05
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Frame = +3
Query: 363 YDYIIVGAGSAGCVLASRLTEDPKVTVLLLE-VGKP--EMLLTDVPSVAPYFQNTDYAWP 533
YDYIIVG G+AGC LA+ L++ + VLLLE G P + + ++ A +T + P
Sbjct: 49 YDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMTRFADTLSDTSPSSP 106
Query: 534 YYMEPQPGVCLGMINKRCYWPRGRAIGGTSVINYMIYTRGRPE-----EWDRIEAAGNYG 698
G+IN R R +GG S IN YTR E WD Y
Sbjct: 107 AQRFVSED---GVINS-----RPRVLGGGSCINAGFYTRASDEYVRGLGWDLEATTAAYR 158
Query: 699 W 701
W
Sbjct: 159 W 159
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 42.3 bits (95), Expect = 4e-04
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Frame = +3
Query: 345 NAPLPEY-DYIIVGAGSAGCVLASRLTEDPKVTVLLLEVGKPEMLLTDVPSVAPYFQNTD 521
+APL Y +YI+VG G+AGC LA+ L+E + VLLLE G +V S +
Sbjct: 50 DAPLVSYYNYIVVGGGTAGCPLAATLSE--RSRVLLLERGGLPYGNRNVSSEYHFADALA 107
Query: 522 YAWPYYMEPQPGVCLGMINKRCYWPRGRAIGGTSVINYMIYTRG-----RPEEWDRIEAA 686
P + G++N R R +GG S +N YTR R WD
Sbjct: 108 DTSPRSPAQRFVSEDGVVN-----ARARVLGGGSCLNAGFYTRASSGYVRAAGWDPRLVN 162
Query: 687 GNYGWSYKDV 716
+Y W +++
Sbjct: 163 ASYRWVEREL 172
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3
Query: 363 YDYIIVGAGSAGCVLASRLTEDPKVTVLLLEVG 461
YDYIIVG G+AGC LA+ L++ K VLLLE G
Sbjct: 50 YDYIIVGGGTAGCPLAATLSQ--KYKVLLLERG 80
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3
Query: 363 YDYIIVGAGSAGCVLASRLTEDPKVTVLLLEVG 461
YDYI+VG G+AGC LA+ L+ K VLLLE G
Sbjct: 51 YDYIVVGGGTAGCPLAATLS--LKYKVLLLERG 81
>07_03_0683 + 20671067-20671951,20672030-20672203
Length = 352
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 366 DYIIVGAGSAGCVLASRLTEDPKVTVLLLE 455
D ++VGAGSAG A L++DP V+V ++E
Sbjct: 84 DVVVVGAGSAGLSCAYELSKDPSVSVAVIE 113
>09_06_0347 +
22445962-22446154,22446495-22446616,22446764-22446885,
22447405-22447594,22447874-22448014,22448257-22448724,
22448842-22449609,22450185-22450373
Length = 730
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 493 DGTSVNNISGFPTSRRSTVTFGSSVNLDARTHPAEPAPTMM*SYSGNGALRPFGNLY 323
DG +V +SGF R T F ++ L THP + Y+ +G L P ++Y
Sbjct: 500 DGNNVAKLSGFGVCRMLTDEFKATTTLYRHTHPKGTFVYIDPEYAISGDLTPLSDVY 556
>07_03_1089 - 23879483-23881909
Length = 808
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 460 PTSRRSTVTFGSSVNLDARTHPAEPAPTMM*SYSGNGALRP 338
P +RR TV + ++ AR A PA ++ + G+G+LRP
Sbjct: 121 PPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRP 161
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +3
Query: 363 YDYIIVGAGSAGCVLASRLTE-----DPKVTVLLLEVG 461
YD ++VGAG AG A RL + D ++V +LE G
Sbjct: 3 YDVVVVGAGPAGLAAAIRLKQLCRDADTDLSVCVLEKG 40
>09_02_0551 - 10519674-10519883,10519960-10520148
Length = 132
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 471 MLLTDVPSVAPYFQNTDYA-WPYYMEPQPGVC 563
M L+DV AP+F D+A WP GVC
Sbjct: 1 MTLSDVTLTAPHFVPVDFATWPEITPFMDGVC 32
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +3
Query: 354 LPEYDYIIVGAGSAGCVLASRLTEDPK------VTVLLLEVGKPEMLLTDVP 491
LP +IIV G GC++ R T D V LL + K E+L + +P
Sbjct: 243 LPNIKFIIVTLGEKGCLMLERSTTDASEAEEIDVESLLESLEKKEVLSSSMP 294
>03_01_0436 + 3384526-3385236,3387857-3388720
Length = 524
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 563 FRNDK*TVLLAERQGDRRYQRYQL-HDIHEGTARGVGQDRS 682
FR VLL+ R+ +RR +YQL H + T RG DRS
Sbjct: 271 FRMGGAAVLLSNRRAERRRAKYQLMHTVR--THRGGASDRS 309
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +3
Query: 195 NNGNRRSSRSLPQHSVVNLLMQSLSPDYVPSNPSDIFDILRDQYKLPKGLNAPLP----- 359
++G + S+ + S + + +SP + P+D + LP+ +P
Sbjct: 390 SDGKAQGSQHVRPMSPSSSHLILISPSHAFGLPNDAVAFRQPPLLLPRRRRSPPARPPAM 449
Query: 360 --EYDYIIVGAGSAGCVLASRLTED 428
EYD I++G G C+L+ L+ D
Sbjct: 450 DEEYDVIVLGTGLMECILSGLLSVD 474
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 135 VNANCCDAKNSGHVKNRETKNNGNRRSSRSLPQHSVVNLL 254
+NAN C A N+ +K+ R S RSL H +NLL
Sbjct: 705 INANRCTADNNKQIKSLRP---SVRYSLRSLMSHEKINLL 741
>07_01_1105 -
10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 303 FDILRDQYKLPKGLNA--PLPEYDYIIVGAGSAGC 401
F+I ++P G+ A L + +VG GSAGC
Sbjct: 668 FEIAHSNVQMPSGIRALTSLQKLPVFVVGDGSAGC 702
>01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356
Length = 354
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 177 KNRETKNNGNRRSSRSLPQHSVVNLLMQSLSPDYVPSNPSDIFDILRDQYKLPK 338
KN+ ++ + + S P V N +QS YVP N S D+ R + +PK
Sbjct: 77 KNKAASSSSSGKGDASAPSGDVSNNELQSNDTMYVPGNLSYWRDV-RASFVVPK 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,152,668
Number of Sequences: 37544
Number of extensions: 490414
Number of successful extensions: 1508
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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