Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25e04
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 26   RFGNTCYVYFNSELNCCC 79
            RFG   ++  ++ELN CC
Sbjct: 1349 RFGTIAHILASTELNLCC 1366


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 26   RFGNTCYVYFNSELNCCC 79
            RFG   ++  ++ELN CC
Sbjct: 1349 RFGTIAHILASTELNLCC 1366


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 26   RFGNTCYVYFNSELNCCC 79
            RFG   ++  ++ELN CC
Sbjct: 1349 RFGTIAHILASTELNLCC 1366


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 26   RFGNTCYVYFNSELNCCC 79
            RFG   ++  ++ELN CC
Sbjct: 1349 RFGTIAHILASTELNLCC 1366


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 208 VRTITDKRHMPIFRSRFALALKSLLDIIMKLYLKLY 315
           + ++ ++R+M    S   L +++LLDI   LYL  Y
Sbjct: 48  IYSVYERRYMNAHLSGIQLVVRNLLDI--SLYLNAY 81



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 FALALKSLLDIIMKLYLKLY 315
           FA+   S+ D   KLY KLY
Sbjct: 16  FAITPSSIYDKPTKLYQKLY 35


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 44  YVYFNSELNCCCYIAACKNEIFIYIVY 124
           Y Y+   L CC +I    + +F+  +Y
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIY 286


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 498 IDGDHFYIWTHKKFDIGYNGNR 563
           + GD FY + +  FD  Y  NR
Sbjct: 396 LTGDQFYNFLNHNFDRHYEENR 417


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 188 HYLFSIFIGMCVFIAMNYSPHYKQY 114
           H+LF I IGM + I +     Y+ +
Sbjct: 672 HFLFHIVIGMNLIIHVGTQLIYRPF 696


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,913
Number of Sequences: 336
Number of extensions: 3950
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)