Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25e04
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...   227   5e-60
Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine re...    29   2.9  
U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine rec...    29   3.8  
Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical p...    28   6.6  
AF047658-2|ABC71829.1|  170|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    27   8.7  
AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine r...    27   8.7  

>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score =  227 bits (555), Expect = 5e-60
 Identities = 100/182 (54%), Positives = 127/182 (69%), Gaps = 4/182 (2%)
 Frame = +3

Query: 114 ILFIMWTIVHCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYH 293
           +L     +V  DEH H Y+  E+VVLWMNTVGPY NRQETY YFSLPFC G K  IGHYH
Sbjct: 7   LLLFTSLLVEADEHDHLYEVDEEVVLWMNTVGPYSNRQETYTYFSLPFCKGEKKEIGHYH 66

Query: 294 ETLSEALQGVELEFSGLDITFKENVPAQQFCAIELNDQTYKAFVYAVKNHYWYQMYIDDL 473
           ET+ E+L GVELEFSGLDI F+ N      C  +L +  YK  +YA++N Y+YQMY+DD+
Sbjct: 67  ETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKKLTETDYKTLLYAIQNSYYYQMYLDDM 126

Query: 474 PIWGTVGEIDG----DHFYIWTHKKFDIGYNGNRIVEVNLTAENKERLSPDAKIPFTYEV 641
           PIWG VGEID       + ++THK+ DIGYN  ++V+VNLT + +  + P A++ FTYEV
Sbjct: 127 PIWGMVGEIDNTVNPPAYKLYTHKRLDIGYNDKQVVDVNLTTDGRVDIRPGAELTFTYEV 186

Query: 642 NW 647
            W
Sbjct: 187 QW 188


>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
 Frame = +3

Query: 234 YAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDITFKENVPAQQFCAIELNDQTY 413
           + Y+S+PFC      I +  E L E ++G  +  +      K+N      C+ +L+ +  
Sbjct: 54  FEYYSVPFCKPANGDIQYKSENLGEVMRGDRIVNTPYAFHMKKNEQCVSVCSNKLSKENV 113

Query: 414 KAFVYAVKNHYWYQMYIDDLPIWGTVGEI-DGDHFYIWTHKKFDIGYN 554
             F   ++  Y   + +D+LP+   +     GD +Y   ++   IG N
Sbjct: 114 ALFKERIRQEYSAHLIVDNLPVATVINPAQSGDVYYDLGYRLGWIGDN 161


>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
           protein C31E10.8 protein.
          Length = 1272

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +3

Query: 297 TLSEALQGVELEFSGLDITFKENVPAQQFCAIELNDQTYKAFVYAVKNHYWYQMYIDD 470
           TL   LQG+ ++  G  I+FKE   A  + A +LN         A ++ Y ++ ++++
Sbjct: 301 TLQSLLQGIYVDSFGFRISFKEEPNALHYMATKLNHFYANRSKSASEHKYNWKRFLEE 358


>AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein63 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -2

Query: 500 NLTYSAPYWQIVYIHLIPIMVFDSINESFVSLIVEFDGTKLLRRHIFL 357
           ++ +S P+W I Y H+I   V   I +SF   ++ F  +K+     FL
Sbjct: 3   DIDFSTPHWLITYYHVIG--VISLIFDSFSIYLILFKSSKIDNFRYFL 48


>U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine
           receptor, class v protein17 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -2

Query: 593 VFCCKVDFNNPVSIIPNVKFLVSPDVKMVSINLTYSAPYWQIVYIHLIPIMVFDSINESF 414
           VF   V  +N ++++   ++L      +     T     W+I YI+  P+ +F+SI  S 
Sbjct: 90  VFWFLVVRSNGIALMTTQRYLTITQPTLPLTRFTQLLKPWKIAYIYWGPVAIFNSIFLS- 148

Query: 413 VSLIVEFD 390
            SL + FD
Sbjct: 149 -SLEIGFD 155


>Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D2.13 protein.
          Length = 247

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 232 VSCRLWYGPTVFIQSTT 182
           VSCR WYG T+ I  T+
Sbjct: 53  VSCRRWYGTTIVIAGTS 69


>AF047658-2|ABC71829.1|  170|Caenorhabditis elegans Hypothetical
           protein K03H6.7 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 17  STRRFGNTCYVYFNSELNCCCYIAACKNE 103
           S R+FGN+CY++ N  ++      +C+ +
Sbjct: 23  SDRQFGNSCYIFVNQRMDFDSAENSCRRQ 51


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
           protein F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 213 YHNRQETYAYFSLPFCVGTKVTIGHYHETLSE---ALQGVELEFSGLD 347
           Y+N +E   Y SL    G  +  GH+  +L+    A Q   LE+SG D
Sbjct: 803 YNNMKEDDNYLSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSD 850


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
           protein F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 213 YHNRQETYAYFSLPFCVGTKVTIGHYHETLSE---ALQGVELEFSGLD 347
           Y+N +E   Y SL    G  +  GH+  +L+    A Q   LE+SG D
Sbjct: 803 YNNMKEDDNYLSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSD 850


>AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine
           receptor, class x protein1 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 65  LNCCCYIAACKNEIFIYIVYNVDYSSLR*THTFL 166
           L   C++  C    F+YI++N +   +   H FL
Sbjct: 263 LTSMCHVFNCSANAFVYILFNQEIRKILAMHKFL 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,382,789
Number of Sequences: 27780
Number of extensions: 350503
Number of successful extensions: 1166
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)