Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25e01
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 42 5e-04
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 42 6e-04
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 36 0.024
08_02_0741 - 20618319-20618523,20618627-20618684,20618807-206191... 33 0.22
11_01_0329 + 2471015-2471075,2471152-2471432 31 0.67
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 31 0.67
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 30 2.1
03_05_0807 + 27849637-27849823,27850002-27850294,27850736-278509... 30 2.1
04_04_0427 + 25137036-25137119,25137687-25137826,25139775-251398... 29 2.7
02_05_0887 + 32516255-32517292 29 3.6
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 29 4.8
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 29 4.8
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 29 4.8
07_03_1633 - 28281825-28284005 28 6.3
07_03_1310 - 25673140-25673418,25673837-25674082,25674189-256744... 28 6.3
03_01_0256 - 1992298-1993878 28 6.3
10_08_0629 - 19396879-19397685 28 8.3
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 28 8.3
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 28 8.3
02_02_0082 + 6615408-6615606,6615736-6615866,6615957-6616072,661... 28 8.3
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 41.9 bits (94), Expect = 5e-04
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Frame = +1
Query: 157 WAVLHPA---CG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALT 324
W L P CG GR QSPI I+ + +P S ++ + +N TI N G + +
Sbjct: 223 WGKLSPEYRMCGEGRSQSPIDINTKTVVPRS--DLDTLD-RNYNAVNATIVNNGKDITM- 278
Query: 325 IPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHII 504
K+ E + I G P Y +H+H SEHT+N R PLE+H++
Sbjct: 279 --KFHGEVGQV-----IIAGKP----YRFQAIHWH------APSEHTINGRRFPLELHLV 321
Query: 505 HRN 513
H++
Sbjct: 322 HKS 324
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 41.5 bits (93), Expect = 6e-04
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Frame = +1
Query: 124 GWGYRASDQRRWAVLHP---ACG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLT 291
G+ A+ +W LH CG G++QSPI I+ + + P ++ Y+ G T
Sbjct: 57 GYENDATGPAKWGSLHKEWAVCGDGKKQSPIDITTVEPQKVKEPLMQ--AYK---AGATT 111
Query: 292 ITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLN 471
I N GH L S+ +G EY + +H+H SEHT+N
Sbjct: 112 IQNRGHDYMLKWKDGNSKLTVQG------------KEYTLKQVHWH------EPSEHTIN 153
Query: 472 DMRLPLEMHIIHRN 513
R EMH++H +
Sbjct: 154 GTRFDAEMHMVHED 167
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 400 EYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDG 558
+Y + +H+H SEHT+N R PLE+H++H N+ T A + G
Sbjct: 112 KYTLKQMHWH------SPSEHTINGFRFPLELHMVHTNENGNITVLAFLYRFG 158
>08_02_0741 -
20618319-20618523,20618627-20618684,20618807-20619164,
20619253-20619337,20619452-20619726,20619807-20620039,
20620371-20620398
Length = 413
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +1
Query: 49 TNITMKYFGIIAVFTLVVINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPIAISARQAI 228
T +T+ Y G++ VF N+ V R P+ + SPI+ +A+ +
Sbjct: 187 TQMTIFYDGLVNVFD----NIPVEKAQELMLLASRASIPSPPSAARKSDSPISAAAKLTV 242
Query: 229 PISIPAIELIGYQNPLPGPLT--ITN--TGHSVALTIPK-YTSEEEKKG 360
P ++PA +++ + PL ++N T S A+T+PK ++S + G
Sbjct: 243 PEALPARQIVVQKPEASVPLVSGVSNPITIVSQAVTLPKSFSSSNDSAG 291
>11_01_0329 + 2471015-2471075,2471152-2471432
Length = 113
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 91 TLVVINVSVAAGWGYRASDQ---RRWAVLHPA---CG-GRQQSPIAISARQAI 228
T V + A +GY A + W L PA CG G++QSPI I +QAI
Sbjct: 29 TAVAADYGYPADYGYAAGSKLGPENWGKLSPAYKLCGDGKKQSPIDIVTKQAI 81
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 400 EYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDG 558
+Y++ LH+H SEHT+N R +E+H++H + T A+ + G
Sbjct: 111 KYKLRQLHWH------SPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHG 157
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 403 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIH 507
Y++ LH+H SEHT+N R +E+H++H
Sbjct: 117 YKLKQLHWH------TPSEHTVNGRRYDMELHLVH 145
>03_05_0807 +
27849637-27849823,27850002-27850294,27850736-27850973,
27851075-27851410,27851496-27851581,27851678-27851785,
27851878-27852185,27852265-27852528,27852610-27853381
Length = 863
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 523 RNTAEAMQHPDGL-CVLAFFYQVVEFDAKLLS----PIVKNLTAIENFNSTLQLPHT 678
R+T E P L F Q+VE ++K+L+ P++KN NF TL P+T
Sbjct: 786 RDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNT 842
>04_04_0427 +
25137036-25137119,25137687-25137826,25139775-25139846,
25141160-25141470,25141595-25141705,25143548-25143640,
25144063-25144212,25145062-25145120,25145636-25145693,
25146351-25146622
Length = 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 321 DNPQVHFGRGEERLPSTLHLWRS 389
D V +GRG+ R + LH+WRS
Sbjct: 373 DKGVVRYGRGDSRRETCLHVWRS 395
>02_05_0887 + 32516255-32517292
Length = 345
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Frame = -1
Query: 484 EDAYRSMC------APILCCSCHPSG------NADHRSHTRCLGDLQRCKVDGSLSSPLP 341
EDA S+C A +L CS H G HR H+ CL ++ G+L LP
Sbjct: 48 EDANCSVCMEYPHNAVLLLCSSHDKGCRPYMCGTSHR-HSNCLDQFKKAYTKGALLEELP 106
Query: 340 KCTWGLSM 317
T G ++
Sbjct: 107 ANTVGTNL 114
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 283 PLTITN-TGHSVALTIPKYTSEEEKK-GFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGS 456
P+ I+ +G I K E K GF + + P E EIDG+H+H+ +++
Sbjct: 176 PIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAP--REKEIDGVHYHFTERSK--I 231
Query: 457 EHTLNDMRLPLEMHIIHRNKKYRNTAEAMQ 546
E +++ + LE +H N Y + EA++
Sbjct: 232 EEEISEGKF-LEFAHVHGN-VYGTSVEAVE 259
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 403 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRN 513
Y++ +H+H SEHT++ R +E+H++H N
Sbjct: 119 YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLN 149
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 403 YEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRN 513
Y++ +H+H SEHT++ R +E+H++H N
Sbjct: 120 YQLRQMHWH------TPSEHTIDGRRYDMELHMVHLN 150
>07_03_1633 - 28281825-28284005
Length = 726
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 169 HPACGG-RQQSPIAISA--RQAIPISIPAIELIGYQNPLPGPLTITNT 303
HP+ R+ +PIA SA R + P S+PA+ + L G +TN+
Sbjct: 25 HPSLARHRRVNPIAFSAAVRASDPASLPALHAVAVTTGLHGFAAVTNS 72
>07_03_1310 -
25673140-25673418,25673837-25674082,25674189-25674465,
25675474-25675751,25675845-25676378
Length = 537
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 148 QRRWAVLHPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLP-GPLTITNTGHSVALT 324
+R + +H A + P+ +A+ + P ++ A E + P+ G T+ + AL
Sbjct: 35 RRTVSAVHAADPAKSNGPVQAAAKASSPSTVAAPE----KKPVGLGKWTVDSWKAKKALQ 90
Query: 325 IPKYTSEEE 351
+P+Y S+EE
Sbjct: 91 LPEYPSQEE 99
>03_01_0256 - 1992298-1993878
Length = 526
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 205 LWETADGRHKQGAVPPNVS 149
++ TADG K G++PPNVS
Sbjct: 52 VYYTADGASKPGSLPPNVS 70
>10_08_0629 - 19396879-19397685
Length = 268
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -1
Query: 442 SCHPSGNADHRSHTRCL----GDLQRCKVDGSLSSPLPKCTW 329
+C PS + DHR C+ + K+DG++ + P+ W
Sbjct: 104 ACLPSSDPDHRLAVACVKHEYAPAEATKMDGAIQTVYPRKNW 145
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +1
Query: 280 GPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSE 459
G + T TGHS +T K+ +E G D +I + ++ N
Sbjct: 223 GQILCTLTGHSKKITSLKFVPRDE-------LFVTGSADKTVKI----WQGSEEGNYNCI 271
Query: 460 HTLNDMRLPLEMHIIHRNKKYRNTA 534
HTL D +E +H +KY TA
Sbjct: 272 HTLKDHTAEVEAVTVHATQKYFVTA 296
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 433 PSGNADHRSHTRCLGDLQRCKVDG 362
P G+AD + + RC+GD C+ G
Sbjct: 41 PEGSADPQPYRRCVGDPPTCRCAG 64
>02_02_0082 +
6615408-6615606,6615736-6615866,6615957-6616072,
6617109-6617230,6617353-6617645,6617774-6617875,
6620437-6620865,6621026-6621775,6621915-6622109
Length = 778
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 555 WPMCARVLLSGCGIRCQALKSYREEPNGHREL 650
WP+ +L+ G+RC ALK RE P E+
Sbjct: 650 WPLVEAEMLAKLGLRCTALKC-RERPGLESEV 680
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,489,750
Number of Sequences: 37544
Number of extensions: 479308
Number of successful extensions: 1276
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -