Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25d19
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 34 0.018
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 34 0.018
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 33 0.032
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 33 0.042
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 33 0.055
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 30 0.29
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 30 0.39
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 29 0.68
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 28 1.2
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 28 1.6
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 2.7
SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease ... 27 2.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.7
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 2.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.6
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos... 26 4.8
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 26 4.8
SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces p... 26 4.8
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 26 6.3
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 26 6.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 6.3
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 25 8.4
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 25 8.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 8.4
SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 8.4
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 34.3 bits (75), Expect = 0.018
Identities = 37/169 (21%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Frame = +3
Query: 261 IKTEWDSYHNNNRLSARV-YEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLP 437
+K E + + N+L + YE K+ +Q LL+ ++ ++ + E+ TER++ + N
Sbjct: 347 LKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKNEE 406
Query: 438 L--------LVCSECLSNRDGRRSSELTYDLADTELK----KELCVTESNKKMLIDRCQS 581
+ V ++C S + R+S E + +LK KE + +S + + ++ +
Sbjct: 407 VKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSE- 465
Query: 582 AWEKINKLEVVKFKLQLDLNDKTEALQIDKDMLSLDKDCANITYKTDSL 728
A ++ ++ KL ++ D +L++ ++ LSLD ++ KT+ +
Sbjct: 466 AENSLSSHDIDSQKLNSEIADL--SLRLQQEELSLDDIRKSLQGKTEGI 512
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 34.3 bits (75), Expect = 0.018
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Frame = +3
Query: 336 STLQELLDRIDREMGSLKEEKASTERELEQLN------------LPLLVCSECLSNRDGR 479
++LQE + DR++ +E+ + E EL +L L LLV L +D +
Sbjct: 491 TSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLK 550
Query: 480 RSSELTYDLADTELKKELCVTESNKKMLIDRCQSAWEKINKLEVVKFKLQLDLNDKTEAL 659
++ E Y ++ + ++ ES+ C S EKIN+L +L+L LN+ +
Sbjct: 551 QAGENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKY 610
Query: 660 Q 662
Q
Sbjct: 611 Q 611
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 33.5 bits (73), Expect = 0.032
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +3
Query: 315 YEIEQWKSTLQELLDRIDREMGSLKEEKASTERE--------LEQLNLPLLVCSECLSNR 470
+E+E + ++ + +RE+ L+E+ AS ER L + N + + L ++
Sbjct: 545 HELETMHRSQRDKQESTERELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSK 604
Query: 471 DGRRSSELTYDLADTELKKELCVTESNKKMLIDRCQSAWEKINKLEVVKFKLQLDLNDKT 650
D R + L +L TE + + E +++ I + + E + +L KLQLD ND
Sbjct: 605 D-RELANLGVELKSTENRYRQLLQEKEEELEIQKA-AVDESLLQLS----KLQLDRNDID 658
Query: 651 EALQIDKDML 680
+A+ D L
Sbjct: 659 QAMDTQIDEL 668
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 33.1 bits (72), Expect = 0.042
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 4/170 (2%)
Frame = +3
Query: 219 DLRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRID---REMGSLK 389
D S Q R+K E D NN++ A E + WKS EL I+ ++ S++
Sbjct: 614 DKHRSESQAALNRRVKWENDF---NNKIKALREEKKAWKSEESELKSSIESLISQLESIR 670
Query: 390 EEKASTERELEQLNLPLLVCSECLSNRDGRRSS-ELTYDLADTELKKELCVTESNKKMLI 566
+ QL L L + L + S ++ + T+ + M++
Sbjct: 671 NSQIDIAFSKNQLELKLQLYETKLKEYEQHLSCVNISKKQVSSSSDTSFGNTKMDSSMIL 730
Query: 567 DRCQSAWEKINKLEVVKFKLQLDLNDKTEALQIDKDMLSLDKDCANITYK 716
++ ++ + + K ++ L + LQ + ++L D + N+ Y+
Sbjct: 731 SNSEAVSDEQERELIESEKHRMKLESENLHLQANIELLKKDLEAINVVYE 780
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 32.7 bits (71), Expect = 0.055
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Frame = +3
Query: 264 KTEWDSYHNNNR--LSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLP 437
K E +S NN LS + EQ KS LQE + D E+ L + + + E++++ L
Sbjct: 956 KGELESLRENNATVLSEKAEFNEQCKS-LQETIVTKDAELDKLTKYISDYKTEIQEMRLT 1014
Query: 438 LLVCSECLSNRDG-------------RRSSELTYDLAD-TELKKELCVTESNKKMLIDRC 575
+E ++G R +S L D++ + K+EL V + +++ I+
Sbjct: 1015 NQKMNEKSIQQEGSLSESLKRVKKLERENSTLISDVSILKQQKEELSVLKGVQELTINNL 1074
Query: 576 QSAWEKINKLE-----VVKFKLQLD-LNDKTEALQI----DKDMLSLDKDCAN 704
+ EK+N LE + K K +L+ LNDK + Q+ +K++ + K+C N
Sbjct: 1075 E---EKVNYLEADVKQLPKLKKELESLNDKDQLYQLQATKNKELEAKVKECLN 1124
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = +3
Query: 384 LKEEKASTERELEQLNLPLLVCSECLSNRDGRRSSELTYDLADTELKKELCVTESNKKML 563
L EE + T R L++ LS++ + D EL K++ E + +
Sbjct: 150 LTEEMSKTLRALKEEKKMYFNYDNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEI 209
Query: 564 IDRCQSAWEKINKLEVVKFKL---QLDLNDKTEALQIDKDMLSLDKDCANITYKTDS 725
D + + +L+ K K+ + + + QI K L DCAN+ ++ +S
Sbjct: 210 SDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQFQIKKLSLERQYDCANLEFEHNS 266
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/93 (19%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 156 DWDARLYGLQVTADTRRADAFDLRHSAHQLRNET-RIKTEWDSYHNNNRLSARVYEIEQW 332
+ ++R +Q + + + +++ +++ ET R+ T D + AR IEQ
Sbjct: 132 EMNSRFDAVQNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQ--KTEARFQSIEQR 189
Query: 333 KSTLQELLDRIDREMGSLKEEKASTERELEQLN 431
+++ + + IDR S+++ S ++++E ++
Sbjct: 190 FNSIDQRFNSIDRRFDSMEQRLDSMDQKMETID 222
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 29.1 bits (62), Expect = 0.68
Identities = 18/93 (19%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 156 DWDARLYGLQVTADTRRADAFDLRHSAHQLRNET-RIKTEWDSYHNNNRLSARVYEIEQW 332
+ ++R +Q + + + +++ +++ ET R+ T D + AR IEQ
Sbjct: 132 EMNSRFDTVQNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQ--KTEARFQSIEQR 189
Query: 333 KSTLQELLDRIDREMGSLKEEKASTERELEQLN 431
+++ + + IDR S+++ S ++++E ++
Sbjct: 190 FNSIDQRFNSIDRRFDSMEQRLDSMDQKMETID 222
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 327 QWKSTLQELLDRIDREMGSLKEEKASTERELEQL-------NLPLLVCSECLSNRDGRRS 485
+W+S +++ ++DR++ LK + E +L+QL N+ +L +NR G+R
Sbjct: 19 KWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIARANRHGKRL 78
Query: 486 SE 491
+E
Sbjct: 79 AE 80
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 351 LLDRIDREMGSLKEEKASTER-ELEQLNLPLLVCSECLS 464
+LD DR + S++ KASTE+ + + + + V SEC+S
Sbjct: 558 VLDVNDRFLRSIEVGKASTEKGHVRKTSFDISVASECMS 596
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Frame = +3
Query: 297 RLSARVYEI-------EQWKSTLQELLDRIDREMGSLKEEKASTERELEQ 425
RL +R++EI EQ + +E + ++ + + E K + ERELEQ
Sbjct: 927 RLESRLFEISKQLDNSEQENNKFRERIAELESHLSNYAEAKLAQERELEQ 976
>SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 459 DILSRLVEEDSVVQAPFRWKPSLLSNFPFRGQCGQAIL 346
+ +S+ +++DSVV+A PS S FP C QA+L
Sbjct: 137 EAVSKKLKKDSVVKAD----PSNSSTFPISDSCKQALL 170
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 2.7
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 372 EMGSLKEEKASTERELEQLNLPLLVCSECLSN-RDGRRSSELTYDLADTELKKELCVTES 548
E S KEE +ST+R+L ++ L E L R SE T DTE+ E
Sbjct: 1447 EFNSTKEELSSTQRKLSEIMDILNTTKEELEKVRQNSNKSEGT--SKDTEIPNE--EEME 1502
Query: 549 NKKML---IDRCQSAWEK-INKLEVVKFKLQLDLNDKTEALQ 662
KK++ + R +S K + K E+++ + Q+ L D+ +ALQ
Sbjct: 1503 RKKVMQQEVLRLRSRIAKELQKNELLRKQNQV-LQDQVKALQ 1543
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 312 VYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDGRRS 485
+YE+ Q S LQ+ + +++ KE + + RE++ L+ ++ + +RD ++S
Sbjct: 411 IYELRQKVSILQKRIAEESKQLALNKEVRKISSREIKMLDARSMLKNSFDGSRDLQKS 468
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = +3
Query: 288 NNNRLSARVYEIEQWKSTLQELLDRIDRE 374
N+N L + ++++ +W+S + LL ++ ++
Sbjct: 3261 NSNGLKSYIFKLRKWRSYFERLLSKVPKK 3289
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 3.6
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 25/193 (12%)
Frame = +3
Query: 180 LQVTADTRRADAFDLRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLD 359
LQ + +RA+ DL+ + +E S N L + +++ + +Q+LLD
Sbjct: 1030 LQTEIEKKRAENDDLQSKLSVVSSEYE-NLLLISSQTNKSLEDKTNQLKYIEKNVQKLLD 1088
Query: 360 RIDR----------EMGSLKEEKASTEREL--------EQLNLPLLVCSECLSNRDG--- 476
D+ + G L EE A + EL +Q +L + D
Sbjct: 1089 EKDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQ 1148
Query: 477 --RRSSELTYDLADTELKKELCVTESNK--KMLIDRCQSAWEKINKLEVVKFKLQLDLND 644
+EL L + E V E + L D +S + N + V++ L + +ND
Sbjct: 1149 LTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDL-VRVND 1207
Query: 645 KTEALQIDKDMLS 683
+ + L+ DKD LS
Sbjct: 1208 ELDTLKKDKDSLS 1220
>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
Rec8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.8
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)
Frame = +3
Query: 168 RLYGLQVTADTRRADAFDLRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQ 347
R+ L+ T RR A + + E +W+S+H L + +++ +T
Sbjct: 315 RMIALEATKYVRRRGASSAK------KKELNKFFDWESFHP--LLKPWIEKLKPSNNTPS 366
Query: 348 ELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLS----NRDGRRSSELTYDLADT 515
E+ D + S E + EL LN+P S S + SE + L DT
Sbjct: 367 EIDDVLRNIDTSEVEVGRDVQGELG-LNIPWNTSSRSNSAINSKSHSQTGSEHSTPLLDT 425
Query: 516 ELKKELCVTESNKKMLIDRCQSAWEKINKLEVVKFKLQLDLNDKTEALQIDKD-----ML 680
+ +K L + S + A E E + +L L L+D + ++ ML
Sbjct: 426 KYRKRLPHSPSMPSRV--EFLPALESSQFHETLNSELSLQLSDDFVLYKNTQEENAHLML 483
Query: 681 SLDKDCAN 704
S++K+CAN
Sbjct: 484 SMEKECAN 491
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 RIKTEWDSYHNNNR-LSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQ 425
R+ +++ Y ++ + L R+ E+++ + + +I+R+M K K S ELE+
Sbjct: 741 RLLSDYQQYKDDVKDLKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEK 797
>SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 42 VINIFLEIWYFLLLPNILI 98
+I+I+ IW FLLLP I+I
Sbjct: 7 LISIWNAIWNFLLLPEIII 25
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 327 QWKSTLQELLDRIDREMGSLKEEKASTEREL 419
+WK+ L+ L+ +D + G +KE+ S +REL
Sbjct: 12 RWKA-LERQLEMLDLQEGFIKEDCKSLKREL 41
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 504 DRRSTQNFFYRHGWIDILSRLVEEDSVVQAPFRWKP 397
+RRS Y WI +L LVE S + ++P
Sbjct: 335 ERRSFVEVLYADEWISLLDLLVEISSSLPKSLNYRP 370
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 6.3
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 291 NNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERE-LEQLNLPL-LVCSECLS 464
N +S ++ ++E + Q+ DR+ G L + +++ E LE+ L L + L
Sbjct: 886 NRNVSEKMNDLE---NAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLKLALQDELK 942
Query: 465 NRDGRRSSELTYDLADTELKKELCVTESNKKMLIDRCQS 581
NR+ +Y+ T+L++++ E + +LID +S
Sbjct: 943 NRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELES 981
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 8.4
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Frame = -3
Query: 588 PKRIDNDLSTSSCCFLLRKAPF---SIQYRQDRRSTQNFFYRHGWIDILSRL--VEEDS- 427
PK ID D++ S+ L R+ YRQ R FF+RH +D VE +
Sbjct: 134 PKWIDMDIAHSNWNRLSREGVLYGGMKSYRQMCRYFSGFFWRHPLLDPYKYYWRVEPSTK 193
Query: 426 ----VVQAPFRWKPSLLSNFPF---RGQCGQAILGAWTSIVQF 319
V + PFR L + F + GQ + W S ++F
Sbjct: 194 LLCEVNKDPFRQLRLLNKTYGFVITLFEIGQTVPSLWNSTLEF 236
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 312 VYEIEQWKSTLQELLDRIDREMGSLKEEKAST 407
VY I+Q K Q L DR+ +K+E+ S+
Sbjct: 43 VYTIDQVKEAYQVLSSEKDRQQYQIKQEEESS 74
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 8.4
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +3
Query: 264 KTEWDSYHNNNRLSARVY---EIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNL 434
+ E DS N + +V E E KS +LL ++ ++ SL ++ + + E+E +
Sbjct: 658 EAEVDSLRKENEENKQVIALKESELVKSNDNKLL--LNEQIESLNDQLSQLKTEMESVTT 715
Query: 435 PLLVCSECLSNRDGRRSSELTYDLADTELKKELCVTESNKKM 560
++ LSN R + EL D + +L++ + SN +
Sbjct: 716 SKESLADYLSNLKERHNDEL--DSLNKKLREFEGILSSNSSL 755
>SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 25.4 bits (53), Expect = 8.4
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Frame = +3
Query: 183 QVTADTRRADAFDLRHSAHQL--------RNETRIKTEWDSYHNNNRLSARVYE-IEQWK 335
Q+ + A+A + R+S++ L +E ++ + +N + Y+ IE+
Sbjct: 14 QIRCEREIAEAAEARNSSNSLIVVDEYSKESEDVLENGLEHVQSNEFTESEDYKSIERSL 73
Query: 336 STLQELLDRIDREMGSLKEEKASTERELEQLNL 434
+ + ++ R ++EMGSL+++ + L+ NL
Sbjct: 74 AVTEAVMARFEKEMGSLRDQMNFFHQILDNDNL 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,855,626
Number of Sequences: 5004
Number of extensions: 58551
Number of successful extensions: 238
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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