Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25d11
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical...    30   1.8  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   3.1  
AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p...    28   7.1  
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p...    28   7.1  
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass...    28   7.1  
AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 521 EYLKITEWGFVGSDNLCITSHSMILLEYDNNCE 619
           E++  TE+ +VG D + I +  +  +E+ NNC+
Sbjct: 229 EFILPTEYSYVGMDEISIENFIVNRVEHSNNCQ 261


>AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical
           protein T02H6.2 protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 319 YMNLFPTYSLVAYGTIPATDGESLLTLTLEPAESTTGSESRPTEKIRREN 468
           +M  F T ++  Y     TDGE+LL  T      T G+E   T +I  +N
Sbjct: 162 FMGHFNTLNVTNYDE-SETDGEALLAATSSAPTPTEGAEDMETGEIEEDN 210


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 557 SDNLCITSHSMILLEYDNNCE*LMICDEKYLK 652
           S+   +  + ++LLEYD  CE  + CD  YLK
Sbjct: 219 SETFSVKENEVVLLEYDGECETDIACD--YLK 248


>AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.6 protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 62  CSLCIQSSLKLYSRCTTSMSKAMNKFLNENWKKLSEELQVPMEEALRDFLK 214
           C  C++S      R      +  +  + ENWK       VP+  A+RD LK
Sbjct: 173 CEACVESDFTQKKRVVCLTCEGRSGGITENWKP-----HVPINYAIRDLLK 218


>Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical
           protein C27H2.2a protein.
          Length = 906

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 325 NLFPTYSLVAYGTIPATDGESLLTLTLEPAESTTGSESRPTEKIRRENQWVISHRHS 495
           N+  +  L    TIP+ D  S L L   P E  TG+   P+ K R  ++   S  +S
Sbjct: 336 NMLDSIYLDVAKTIPSVDAMSTLDLRKIPKELNTGTLPAPSSKKREYSKNFTSFANS 392


>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
           protein 2, isoform a protein.
          Length = 1538

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = +3

Query: 513 RCLNILKSPSGDSWDQTIYASL 578
           +C+N+LK  +G+ W++ +Y ++
Sbjct: 573 KCINVLKILTGEDWNEVMYLAI 594


>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
           protein 2, isoform c protein.
          Length = 1926

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = +3

Query: 513 RCLNILKSPSGDSWDQTIYASL 578
           +C+N+LK  +G+ W++ +Y ++
Sbjct: 573 KCINVLKILTGEDWNEVMYLAI 594


>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 177 protein.
          Length = 1667

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 104 CTTSMSKAMNKFLNENWKKLSEELQVPMEEALRDFLKPLADHAFATL 244
           C + + K    FL++  KK    L +P+  + RDF++  A  AFA L
Sbjct: 809 CFSILVKMQASFLSKQLKKTFNNL-LPLFASSRDFVRRFAAEAFAYL 854


>AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical
           protein Y62H9A.1 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 7   FIINYLYNICCFQSILFKMFALY 75
           F+  +L+NICC  +IL  M  LY
Sbjct: 101 FVTAHLFNICCTLAILCSMSFLY 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,098,892
Number of Sequences: 27780
Number of extensions: 243851
Number of successful extensions: 673
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)