Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25d06
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 717 WPTSFPSEAPHQCH 676
           WP +     PH+CH
Sbjct: 337 WPYTMYFRMPHRCH 350


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 70  ILLF*YIPILHLVQLMCIVIVAVVCN 147
           I LF  IP++ L+ L CI+   ++ N
Sbjct: 242 IFLFFIIPLIILLILYCIIAKNLMSN 267


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 147 IAYYSNNHY 121
           + YY NNHY
Sbjct: 435 VGYYENNHY 443


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 147 IAYYSNNHY 121
           + YY NNHY
Sbjct: 383 VGYYENNHY 391


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 595  PETRDPTYLKIIQRFEERKQAPYSIH 672
            P   +P  ++ ++  EER++AP S+H
Sbjct: 1777 PIDEEPPSVEAVE--EEREEAPPSVH 1800


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,061
Number of Sequences: 336
Number of extensions: 4580
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)