Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25d06
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.58 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 638 NLCMIFK*VGSLVSGDHTQSTDKCTLTRATPNTICPH 528
           N+C I   +G L  GDH  S     + RA  +  CPH
Sbjct: 648 NICEILLDLGVLKFGDHAHSLAIGIVKRAFMHLGCPH 684


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 515 PHPLSEVKPSSPI 477
           PHP +   PSSPI
Sbjct: 745 PHPATRASPSSPI 757



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 515 PHPLSEVKPSSPIGTKPFLYVHHI 444
           PHP S +   SP+G     ++HH+
Sbjct: 800 PHPHSALSSHSPVGAGSH-HLHHL 822


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,555
Number of Sequences: 2352
Number of extensions: 17837
Number of successful extensions: 72
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)