Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25d06
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...   101   7e-22
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    49   4e-06
U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL031630-12|CAA20991.1|  375|Caenorhabditis elegans Hypothetical...    28   7.7  

>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score =  101 bits (241), Expect = 7e-22
 Identities = 44/93 (47%), Positives = 61/93 (65%)
 Frame = +1

Query: 412 LDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVW 591
           ++ +++ +TS  W TYR+ F PIG  G ++D+GWGCMLRC QM+LG  L+R H+   + W
Sbjct: 50  IEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEW 109

Query: 592 SPETRDPTYLKIIQRFEERKQAPYSIHQVALMG 690
             E     Y KI+Q F + K A YSIHQ+A MG
Sbjct: 110 DIEKTSEIYEKILQMFFDEKDALYSIHQIAQMG 142


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 430 DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVWSPETR 606
           D  S +W TYR  F  + D   T+D GWGCM+R  QM++  A++      DW ++   R
Sbjct: 174 DYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQMMVAQAIMVNRFGRDWRFTRRKR 232


>U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical
           protein F48E8.3 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -1

Query: 575 DKCTLTRATPNTICPHRNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSK 411
           D   + RA    I    NIQ HP + V P  P     FL    I    +LLI SK
Sbjct: 237 DGVKIARALGAKIIGMENIQIHPTAFVDPKDPSAGTKFLAAEAIRGKGALLINSK 291


>U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical
           protein F46G11.1 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 56  FYLNIFYCFNIFPYY 100
           ++LNIF+CF + PYY
Sbjct: 601 YFLNIFFCFFLSPYY 615


>AL031630-12|CAA20991.1|  375|Caenorhabditis elegans Hypothetical
           protein Y38H6C.13 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 223 YKIFISVCNKIYFFIRLN 276
           +KIF+S C+  + FIRLN
Sbjct: 24  FKIFLSACSNFFQFIRLN 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,391,353
Number of Sequences: 27780
Number of extensions: 388759
Number of successful extensions: 1052
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)