Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25d03
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069491-1|AAL39636.1|  483|Drosophila melanogaster LD21956p pro...    29   3.6  
AF096866-1|AAC72971.1|  487|Drosophila melanogaster bicoid-inter...    29   3.6  
AE014298-2768|AAF48886.1|  483|Drosophila melanogaster CG7001-PA...    29   3.6  

>AY069491-1|AAL39636.1|  483|Drosophila melanogaster LD21956p
           protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 180 WLCGVMACRILDENQHVNPRHVLTSRADTRERNVTPKRGMKGNPNVRE 323
           W  GV+AC++L +      RH+L      R  +V P+ G+   P++ +
Sbjct: 339 WALGVIACQMLTQKSPNIKRHLL-----RRRESVEPEDGLSNAPSIAQ 381


>AF096866-1|AAC72971.1|  487|Drosophila melanogaster
           bicoid-interacting protein 4 protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 180 WLCGVMACRILDENQHVNPRHVLTSRADTRERNVTPKRGMKGNPNVRE 323
           W  GV+AC++L +      RH+L      R  +V P+ G+   P++ +
Sbjct: 343 WALGVIACQMLTQKSPNIKRHLL-----RRRESVEPEDGLSNAPSIAQ 385


>AE014298-2768|AAF48886.1|  483|Drosophila melanogaster CG7001-PA
           protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 180 WLCGVMACRILDENQHVNPRHVLTSRADTRERNVTPKRGMKGNPNVRE 323
           W  GV+AC++L +      RH+L      R  +V P+ G+   P++ +
Sbjct: 339 WALGVIACQMLTQKSPNIKRHLL-----RRRESVEPEDGLSNAPSIAQ 381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,970,062
Number of Sequences: 53049
Number of extensions: 303646
Number of successful extensions: 590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)