Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c23
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    25   2.7  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   3.5  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    24   4.7  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 376 LSPRHILPRSMLHWSPFSSLFYPCCAK 296
           L P  +LP    +W+   SL  P C++
Sbjct: 181 LDPARLLPEGKAYWTYLGSLTTPPCSE 207


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 317 FLPMLC*ERAALFHKITRIHVSVAAIKLPKWRVQNIWRRLLSQ 189
           + PML   R   + K++     + A ++P   V+N   R  +Q
Sbjct: 372 WFPMLSSRRLLTYEKVSDSEADLGAFEMPATVVENFRERYFTQ 414


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 403 KIQYLLKWKGYKEEESTWEPVENLDCEELIKT 498
           K Q  ++ +   + +  +EPV+   CE L KT
Sbjct: 79  KKQCFMEVRNKNKADGAYEPVDFFSCERLNKT 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,015
Number of Sequences: 2352
Number of extensions: 9390
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)