Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c21
         (689 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031695-1|AAH31695.1|  203|Homo sapiens deleted in a mouse mode...    80   6e-15
BC001082-1|AAH01082.2|  203|Homo sapiens deleted in a mouse mode...    80   6e-15
AY532267-1|AAS46252.1|  200|Homo sapiens DPCD protein.                 80   6e-15
AL627424-15|CAI41040.1|  203|Homo sapiens novel protein protein.       80   6e-15
AL627424-14|CAI41039.1|  170|Homo sapiens novel protein protein.       80   6e-15
AL627424-16|CAI41041.1|  116|Homo sapiens novel protein protein.       49   2e-05
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       31   2.9  
AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen...    31   2.9  
AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens ...    31   2.9  

>BC031695-1|AAH31695.1|  203|Homo sapiens deleted in a mouse model
           of primary ciliary dyskinesia protein.
          Length = 203

 Score = 80.2 bits (189), Expect = 6e-15
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +2

Query: 422 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 601
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 602 WHVEIGDPIPDAISNSDCAEITECKDQP 685
           W +E+GDP P    N     I E    P
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANP 91


>BC001082-1|AAH01082.2|  203|Homo sapiens deleted in a mouse model
           of primary ciliary dyskinesia protein.
          Length = 203

 Score = 80.2 bits (189), Expect = 6e-15
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +2

Query: 422 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 601
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 602 WHVEIGDPIPDAISNSDCAEITECKDQP 685
           W +E+GDP P    N     I E    P
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANP 91


>AY532267-1|AAS46252.1|  200|Homo sapiens DPCD protein.
          Length = 200

 Score = 80.2 bits (189), Expect = 6e-15
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +2

Query: 422 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 601
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 1   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 60

Query: 602 WHVEIGDPIPDAISNSDCAEITECKDQP 685
           W +E+GDP P    N     I E    P
Sbjct: 61  WQLEVGDPAPLGAGNLGPELIKESNANP 88


>AL627424-15|CAI41040.1|  203|Homo sapiens novel protein protein.
          Length = 203

 Score = 80.2 bits (189), Expect = 6e-15
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +2

Query: 422 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 601
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 602 WHVEIGDPIPDAISNSDCAEITECKDQP 685
           W +E+GDP P    N     I E    P
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANP 91


>AL627424-14|CAI41039.1|  170|Homo sapiens novel protein protein.
          Length = 170

 Score = 80.2 bits (189), Expect = 6e-15
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = +2

Query: 422 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 601
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 602 WHVEIGDPIPDAISNSDCAEITECKDQP 685
           W +E+GDP P    N     I E    P
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANP 91


>AL627424-16|CAI41041.1|  116|Homo sapiens novel protein protein.
          Length = 116

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +2

Query: 524 EEYNVDTQVLLRRAWKVKGKLGGEGKWHVEIGDPIPDAISNSDCAEITECKDQP 685
           EEY+  T  LL R W+VK  LG  G+W +E+GDP P    N     I E    P
Sbjct: 2   EEYDEKTSELLVRKWRVKSALGAMGQWQLEVGDPAPLGAGNLGPELIKESNANP 55


>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +2

Query: 311  LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 490
            LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 791  LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 847

Query: 491  HYKFEDGREMVEEYN 535
              + +     V+EYN
Sbjct: 848  EDQVQQDAIKVKEYN 862


>AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen
           T21 protein.
          Length = 534

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +2

Query: 311 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 490
           LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 221 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 277

Query: 491 HYKFEDGREMVEEYN 535
             + +     V+EYN
Sbjct: 278 EDQVQQDAIKVKEYN 292


>AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21979 fis, clone HEP06065. ).
          Length = 720

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +2

Query: 311 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 490
           LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 426 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 482

Query: 491 HYKFEDGREMVEEYN 535
             + +     V+EYN
Sbjct: 483 EDQVQQDAIKVKEYN 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,467,987
Number of Sequences: 237096
Number of extensions: 1616282
Number of successful extensions: 6782
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6782
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)