Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c18
         (286 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040876-1|AAH40876.1|  341|Homo sapiens C6orf85 protein protein.      27   8.3  
AL445309-6|CAI40959.1|  213|Homo sapiens chromosome 6 open readi...    27   8.3  
AL160398-1|CAI12303.1|  213|Homo sapiens chromosome 6 open readi...    27   8.3  

>BC040876-1|AAH40876.1|  341|Homo sapiens C6orf85 protein protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -1

Query: 205 IFSVIASGCVLSWV--RPVCRAEIFIILAF 122
           IF  + +GC+  WV  RPV    I  IL F
Sbjct: 221 IFGYLITGCIADWVGRRPVLLFSIIFILIF 250


>AL445309-6|CAI40959.1|  213|Homo sapiens chromosome 6 open reading
           frame 85 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -1

Query: 205 IFSVIASGCVLSWV--RPVCRAEIFIILAF 122
           IF  + +GC+  WV  RPV    I  IL F
Sbjct: 93  IFGYLITGCIADWVGRRPVLLFSIIFILIF 122


>AL160398-1|CAI12303.1|  213|Homo sapiens chromosome 6 open reading
           frame 85 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -1

Query: 205 IFSVIASGCVLSWV--RPVCRAEIFIILAF 122
           IF  + +GC+  WV  RPV    I  IL F
Sbjct: 93  IFGYLITGCIADWVGRRPVLLFSIIFILIF 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,457,218
Number of Sequences: 237096
Number of extensions: 762951
Number of successful extensions: 1521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)