Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c18
         (286 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   3.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   3.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   3.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    20   6.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   6.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   6.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   6.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 165 FVLYAERRFLLSWHLRQPTV 106
           +V   +  + L WH+ QPTV
Sbjct: 31  YVTRQKNIYELFWHVDQPTV 50


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 165 FVLYAERRFLLSWHLRQPTV 106
           +V   +  + L WH+ QPTV
Sbjct: 31  YVTRQKNIYELFWHVDQPTV 50


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 102 SPRWAAVNAKIIKISALHTGRTHDR 176
           S  W +  AKII I+A +     DR
Sbjct: 12  SGNWGSTIAKIIGINAANFSNFEDR 36


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 165 THDRTQPLAMTLNILIR 215
           TH +  P  +  NILIR
Sbjct: 55  THGKGTPTVVKTNILIR 71


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 185 RLCSVMGSSCMQSGDFYYLGIYGSPPWRHEIEVPDE 78
           R+C+ +GSS    G+   +G      ++  + + DE
Sbjct: 194 RVCTQIGSSMKSVGEVMAIGRKFEEAFQKALRMVDE 229


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 235 IESVVCTRIKIFSVIASGCVLSW 167
           I+ V   R KI+  +   C ++W
Sbjct: 352 IQEVTLLREKIYGALEGYCRVAW 374


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 235 IESVVCTRIKIFSVIASGCVLSW 167
           I+ V   R KI+  +   C ++W
Sbjct: 352 IQEVTLLREKIYGALEGYCRVAW 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,040
Number of Sequences: 438
Number of extensions: 1410
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)