Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25c15
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical p... 202 2e-52
Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical p... 202 2e-52
Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical pr... 202 2e-52
Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical pr... 202 2e-52
AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical ... 30 1.4
Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 29 3.3
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 3.3
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 3.3
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 29 3.3
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 3.3
Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical
protein C27A7.5e protein.
Length = 684
Score = 202 bits (493), Expect = 2e-52
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 1/212 (0%)
Frame = +3
Query: 57 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 233
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 92 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 149
Query: 234 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 413
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 150 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 209
Query: 414 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 593
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 210 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 269
Query: 594 TRVKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 689
R K+ N+ + AFD+PN PL + ++V+
Sbjct: 270 NRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 301
>Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical
protein C27A7.5d protein.
Length = 647
Score = 202 bits (493), Expect = 2e-52
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 1/212 (0%)
Frame = +3
Query: 57 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 233
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 55 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 112
Query: 234 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 413
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 113 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 172
Query: 414 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 593
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 173 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 232
Query: 594 TRVKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 689
R K+ N+ + AFD+PN PL + ++V+
Sbjct: 233 NRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 264
>Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical
protein C27A7.5c protein.
Length = 715
Score = 202 bits (493), Expect = 2e-52
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 1/212 (0%)
Frame = +3
Query: 57 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 233
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 123 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 180
Query: 234 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 413
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 181 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 240
Query: 414 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 593
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 241 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 300
Query: 594 TRVKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 689
R K+ N+ + AFD+PN PL + ++V+
Sbjct: 301 NRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 332
>Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.5a protein.
Length = 713
Score = 202 bits (493), Expect = 2e-52
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 1/212 (0%)
Frame = +3
Query: 57 RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 233
RVLVLYTGGT GM K GV P + V+R +P L+D Y + + + + Y +LP
Sbjct: 121 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 178
Query: 234 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 413
++ +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY
Sbjct: 179 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 238
Query: 414 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 593
S LSFM+E +GK V++TG+Q+P+ + RSDG NL+ A++ A IPEV V+F KL RG
Sbjct: 239 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 298
Query: 594 TRVKKVSNTRIYAFDTPNFPPLLEAKTTLEVD 689
R K+ N+ + AFD+PN PL + ++V+
Sbjct: 299 NRTVKLDNSALEAFDSPNMHPLAQMAINIKVN 330
>AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical
protein C50H11.13 protein.
Length = 350
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 433 WKPSERLLYSLVLRFQYFNLEAMVTTICYALC 528
W S RLL+ V+ L ++ T CY LC
Sbjct: 26 WTNSSRLLFYSVISISLLTLPILLLTFCYILC 57
>Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical
protein F14F8.9 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -2
Query: 452 SLSDGFQHERQDRTTVRSCVGAVQNHESIV-IMVKPLNISRHFYPIVYREIRRIFEFIVF 276
+L R+ +++C + H+ +V +++ N SRH P++Y ++ I+ +
Sbjct: 111 TLGGALDFVREIEKALKNCKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEIYSDRIS 170
Query: 275 VNLVQNFNIRVF 240
V+ V+N RVF
Sbjct: 171 VD-VKNTG-RVF 180
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 706 CINIFGSTSKVVFASNNGGKFGVS 635
C+ I GS ++V++A GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 706 CINIFGSTSKVVFASNNGGKFGVS 635
C+ I GS ++V++A GG FG+S
Sbjct: 458 CVVIVGSAAEVIWAEVYGGSFGIS 481
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 706 CINIFGSTSKVVFASNNGGKFGVS 635
C+ I GS ++V++A GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 706 CINIFGSTSKVVFASNNGGKFGVS 635
C+ I GS ++V++A GG FG+S
Sbjct: 79 CVVIVGSAAEVIWAEVYGGSFGIS 102
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 706 CINIFGSTSKVVFASNNGGKFGVS 635
C+ I GS ++V++A GG FG+S
Sbjct: 592 CVVIVGSAAEVIWAEVYGGSFGIS 615
>Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical
protein F55G11.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 180 YWKNNLAGTDKKDYLALPDGKDTDVKILYQIYEYDELKDSSDFTIDDW 323
Y+ + GT K+Y AL K + ++ ++ +DFT D W
Sbjct: 294 YYGSPTVGTIVKNYTALEINKAVPLNFQGEVLQFVVSSGKADFTFDGW 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,955,942
Number of Sequences: 27780
Number of extensions: 400073
Number of successful extensions: 1149
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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