Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25c08
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 38 0.065
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 38 0.065
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 38 0.065
DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein. 38 0.065
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 38 0.065
AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens ... 35 0.46
AB075855-1|BAB85561.1| 597|Homo sapiens KIAA1975 protein protein. 33 1.1
AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane hel... 31 5.7
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 30 9.9
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain
containing protein ).).
Length = 2193
Score = 37.5 bits (83), Expect = 0.065
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 498 AATVHRSPRPDHQRLGSHXSGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLS 319
A++ HR + D R S ++ + T +T A D+P+ SS+ DT A
Sbjct: 106 ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDTPRASSTQ 164
Query: 318 LDSPQASSSTGPCKLISARTTLIKKKKNDTTF 223
++P+ASS + +L + RT+ ++ T+F
Sbjct: 165 WNTPRASSPSRSTQLDNPRTSSTQQDNPQTSF 196
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 37.5 bits (83), Expect = 0.065
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 498 AATVHRSPRPDHQRLGSHXSGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLS 319
A++ HR + D R S ++ + T +T A D+P+ SS+ DT A
Sbjct: 278 ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDTPRASSTQ 336
Query: 318 LDSPQASSSTGPCKLISARTTLIKKKKNDTTF 223
++P+ASS + +L + RT+ ++ T+F
Sbjct: 337 WNTPRASSPSRSTQLDNPRTSSTQQDNPQTSF 368
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 37.5 bits (83), Expect = 0.065
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 498 AATVHRSPRPDHQRLGSHXSGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLS 319
A++ HR + D R S ++ + T +T A D+P+ SS+ DT A
Sbjct: 278 ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDTPRASSTQ 336
Query: 318 LDSPQASSSTGPCKLISARTTLIKKKKNDTTF 223
++P+ASS + +L + RT+ ++ T+F
Sbjct: 337 WNTPRASSPSRSTQLDNPRTSSTQQDNPQTSF 368
>DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein.
Length = 1144
Score = 37.5 bits (83), Expect = 0.065
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 498 AATVHRSPRPDHQRLGSHXSGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLS 319
A++ HR + D R S ++ + T +T A D+P+ SS+ DT A
Sbjct: 106 ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDTPRASSTQ 164
Query: 318 LDSPQASSSTGPCKLISARTTLIKKKKNDTTF 223
++P+ASS + +L + RT+ ++ T+F
Sbjct: 165 WNTPRASSPSRSTQLDNPRTSSTQQDNPQTSF 196
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 37.5 bits (83), Expect = 0.065
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = -3
Query: 498 AATVHRSPRPDHQRLGSHXSGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLS 319
A++ HR + D R S ++ + T +T A D+P+ SS+ DT A
Sbjct: 106 ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDTPRASSTQ 164
Query: 318 LDSPQASSSTGPCKLISARTTLIKKKKNDTTF 223
++P+ASS + +L + RT+ ++ T+F
Sbjct: 165 WNTPRASSPSRSTQLDNPRTSSTQQDNPQTSF 196
>AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ42547 fis, clone BRACE3004880. ).
Length = 256
Score = 34.7 bits (76), Expect = 0.46
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 VLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVC 424
V L ACG SR++L+A +S + CG SR++L+A +S + V C
Sbjct: 151 VTLSACGLSRVTLSACGLSSMTPSACGLSRVTLSACHLSSMTVSTC 196
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 VLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVC 424
V L A G S ++L+A C+S + L CG S +L A +S V V C
Sbjct: 101 VTLSAWGLSSVTLSACCLSSMTLSACGLSSTTLFACRLSSVTVSTC 146
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 302 ACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVCR 427
ACG SR++L+A +S + + CG S ++L A +S + + CR
Sbjct: 175 ACGLSRVTLSACHLSSMTVSTCGLSSMTLFACGLSSMTLSACR 217
>AB075855-1|BAB85561.1| 597|Homo sapiens KIAA1975 protein protein.
Length = 597
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 672 SSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATSLAHHAA 493
SS+ +L LP SPH+ + KH+ + L+ T + +F+++ H A
Sbjct: 277 SSTTSPKLNLPPSPHANKKKHLKKKSTNNLKDDGLSSTAEEEEEKFMIVSVTGQTCHFKA 336
Query: 492 TVH 484
T +
Sbjct: 337 TTY 339
>AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 65 RMILLGRPTVRMLLFGTCIYALYLENVVSEIQASVNYLASYDGY 196
R+IL P+++ + FG C+ LY + + Q + L +YD Y
Sbjct: 85 RLILDFTPSIKAIPFGGCVAQLYFFHFLGSTQCFLYTLMAYDRY 128
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -2
Query: 592 HSKPASQPQQDHRSRLTALPGPTARNFTGSSR---RNSSSQPTTGSSTLGVTHXRRGSSA 422
HS +S H S T+ A SR R + ++ +G S+ +S
Sbjct: 3128 HSVDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSGDSSRHSVSRHHEAST 3187
Query: 421 HMDYWRHARSIQAQS 377
H D RH++++Q QS
Sbjct: 3188 HADISRHSQAVQGQS 3202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,138,479
Number of Sequences: 237096
Number of extensions: 2801498
Number of successful extensions: 8268
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8163
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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