Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c07
         (288 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064576-1|AAH64576.2|  655|Homo sapiens kelch-like 13 (Drosophi...    27   8.3  
AL591986-1|CAC41335.1|  604|Homo sapiens hypothetical protein pr...    27   8.3  
AC006963-1|AAF03529.1|  622|Homo sapiens WUGSC:H_DJ0278D01.1 pro...    27   8.3  
AB037730-1|BAA92547.1|  639|Homo sapiens KIAA1309 protein protein.     27   8.3  

>BC064576-1|AAH64576.2|  655|Homo sapiens kelch-like 13 (Drosophila)
           protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 272 SYENLLNDNQFLEIIVKTIVMIANSNSAKTMTHIKDILKQNLTL*WIHLN*CNLTFKA*T 93
           ++  LL+  +FL++  + +  + +SNS K  T + ++ K   T  W+ L    + F A  
Sbjct: 222 NFPALLSTGEFLKLPFERLAFVLSSNSLKHCTEL-ELFK--ATCRWLRLEEPRMDFAAKL 278

Query: 92  IKN 84
           +KN
Sbjct: 279 MKN 281


>AL591986-1|CAC41335.1|  604|Homo sapiens hypothetical protein
           protein.
          Length = 604

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 272 SYENLLNDNQFLEIIVKTIVMIANSNSAKTMTHIKDILKQNLTL*WIHLN*CNLTFKA*T 93
           ++  LL+  +FL++  + +  + +SNS K  T + ++ K   T  W+ L    + F A  
Sbjct: 171 NFPALLSTGEFLKLPFERLAFVLSSNSLKHCTEL-ELFK--ATCRWLRLEEPRMDFAAKL 227

Query: 92  IKN 84
           +KN
Sbjct: 228 MKN 230


>AC006963-1|AAF03529.1|  622|Homo sapiens WUGSC:H_DJ0278D01.1
           protein.
          Length = 622

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 272 SYENLLNDNQFLEIIVKTIVMIANSNSAKTMTHIKDILKQNLTL*WIHLN*CNLTFKA*T 93
           ++  LL+  +FL++  + +  + +SNS K  T + ++ K   T  W+ L    + F A  
Sbjct: 189 NFPALLSTGEFLKLPFERLAFVLSSNSLKHCTEL-ELFK--ATCRWLRLEEPRMDFAAKL 245

Query: 92  IKN 84
           +KN
Sbjct: 246 MKN 248


>AB037730-1|BAA92547.1|  639|Homo sapiens KIAA1309 protein protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 272 SYENLLNDNQFLEIIVKTIVMIANSNSAKTMTHIKDILKQNLTL*WIHLN*CNLTFKA*T 93
           ++  LL+  +FL++  + +  + +SNS K  T + ++ K   T  W+ L    + F A  
Sbjct: 206 NFPALLSTGEFLKLPFERLAFVLSSNSLKHCTEL-ELFK--ATCRWLRLEEPRMDFAAKL 262

Query: 92  IKN 84
           +KN
Sbjct: 263 MKN 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,788,867
Number of Sequences: 237096
Number of extensions: 468625
Number of successful extensions: 515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)