Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c07
         (288 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    26   3.8  
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    26   3.8  
Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical pr...    26   3.8  
AF003140-2|ABR92610.1|  233|Caenorhabditis elegans Hypothetical ...    26   3.8  
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr...    26   5.0  
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ...    26   5.0  
U64849-3|AAC48050.2|  351|Caenorhabditis elegans Twik family of ...    25   6.6  
U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical pr...    25   8.7  

>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 153 KFNSLMDPLKLMQFNIQSINNKKWLLKTILKDNSIDL 43
           +F    D ++  Q+N   I     LLKTI K++ I L
Sbjct: 870 RFKKFWDEIECRQYNFTRIEEDVELLKTIKKEDVIAL 906


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 153 KFNSLMDPLKLMQFNIQSINNKKWLLKTILKDNSIDL 43
           +F    D ++  Q+N   I     LLKTI K++ I L
Sbjct: 870 RFKKFWDEIECRQYNFTRIEEDVELLKTIKKEDVIAL 906


>Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical
           protein C01G6.5 protein.
          Length = 952

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -2

Query: 278 NVSYENLLNDNQFLEII 228
           NV+YENL+  N+ LEII
Sbjct: 290 NVAYENLVTKNEKLEII 306


>AF003140-2|ABR92610.1|  233|Caenorhabditis elegans Hypothetical
           protein C44E4.8 protein.
          Length = 233

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 281 FNVSYENLLNDNQFLEIIVKTIVMI-ANSNSAKTMTHIKDILKQNLTL 141
           F  +++ L+++N FLEI +K + ++ A +  AK      +I++    L
Sbjct: 99  FKSTFDYLVHNNHFLEINMKNVALVNALTGDAKQFIVTSNIMEMGYKL 146


>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical protein
            K12D12.2 protein.
          Length = 1696

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 126  KLMQFNIQSINNKKWLLKTILKDNSIDLCLLNETWL 19
            K +   +Q     +++L+T+ + NSID     E WL
Sbjct: 1367 KCVDAKVQLYKTMRFILRTLFEKNSIDTVNEAEEWL 1402


>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
           protein R52.2 protein.
          Length = 1019

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 111 NIQSINNKKWLLKTILKDNSIDLCL 37
           N+QSI +K +L+  ++KD  I + L
Sbjct: 595 NLQSIKSKGYLVNFLIKDKKIPIAL 619


>U64849-3|AAC48050.2|  351|Caenorhabditis elegans Twik family of
           potassium channelsprotein 10 protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 163 ISLMCVIVFAEFELAIITIVLTIISRN 243
           I +  +I+F  F +AI+TI + +++ N
Sbjct: 297 IPVYVIIIFIVFGVAIVTIAIDVVAAN 323


>U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical
           protein C56E10.3 protein.
          Length = 531

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 150 FNSLMDPLKLMQFNIQSINNKKWLLKTILKDNSIDLCLLNETWL 19
           F S  D L+L +  +  + N++ LL   +K+NS++   LN  W+
Sbjct: 384 FASRGDVLELREKRL-IMENERNLLTNQIKENSLECDRLNSQWM 426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,360,134
Number of Sequences: 27780
Number of extensions: 87150
Number of successful extensions: 170
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)