Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c06
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119240-1|AAM51100.1|  362|Drosophila melanogaster SD19562p pro...   146   2e-35
AE014298-2216|AAF48508.2|  362|Drosophila melanogaster CG8288-PA...   144   8e-35

>AY119240-1|AAM51100.1|  362|Drosophila melanogaster SD19562p
           protein.
          Length = 362

 Score =  146 bits (355), Expect = 2e-35
 Identities = 70/129 (54%), Positives = 93/129 (72%)
 Frame = +1

Query: 337 DCIRKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNH 516
           DC+ K A   P  N+      WTP  +R G+IARKIG YPLW K+G+++ TTLLQ+VDNH
Sbjct: 78  DCLVKTA--GPTANEA----VWTPNLRRCGVIARKIGQYPLWLKNGERIRTTLLQIVDNH 131

Query: 517 VIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHL 696
           VIKYIPPEEY P     V  + K+  GCILVG+E  +P+++TK+Y GIF + G+LPK++L
Sbjct: 132 VIKYIPPEEYLPAQVPTVANLHKR--GCILVGSETTNPALLTKEYAGIFRNSGVLPKKNL 189

Query: 697 CRFVVSPES 723
            RF+VSPE+
Sbjct: 190 ARFIVSPEA 198



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 200 RGASRQPRFRPPYWYVPKERVWTDDYLTKENKQFLEEV 313
           +G   +PR R P W++ KE    +D +T ENKQF+ EV
Sbjct: 28  KGHLSRPRLRNPQWFLRKEITKYNDLMTAENKQFVNEV 65


>AE014298-2216|AAF48508.2|  362|Drosophila melanogaster CG8288-PA
           protein.
          Length = 362

 Score =  144 bits (350), Expect = 8e-35
 Identities = 64/108 (59%), Positives = 85/108 (78%)
 Frame = +1

Query: 400 WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWV 579
           WTP  +R G+IARKIG YPLW K+G+++ TTLLQ+VDNHVIKYIPPEEY P     V  +
Sbjct: 93  WTPNLRRCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANL 152

Query: 580 EKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES 723
            K+  GCILVG+E  +P+++TK+Y GIF + G+LPK++L RF+VSPE+
Sbjct: 153 HKR--GCILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEA 198



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 200 RGASRQPRFRPPYWYVPKERVWTDDYLTKENKQFLEEV 313
           +G   +PR R P W++ KE    +D +T ENKQF+ EV
Sbjct: 28  KGHLSRPRLRNPQWFLRKEITKYNDLMTAENKQFVNEV 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,074,893
Number of Sequences: 53049
Number of extensions: 690113
Number of successful extensions: 1393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)