Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c02
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    27   0.21 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.48 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.48 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.9  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 430 WFGKTIVIPFFVTFWEVLTDTEPQETRKNITRLSFRRYCFRKGEIFDTTLDSGSIRHGS 606
           W GK I  P+   +   +  T   E    +T  S+    F KGE+FD T+ + +I + +
Sbjct: 66  WTGKNITTPWDYYY---IYHTLVAEQSYGLTLPSWTNNIFPKGELFDATVFTYNITNST 121


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 430 WFGKTIVIPFFVTFWEVLTDTEPQETRKNITRLSFRRYCFRKGEIFDTTLDSGSIRHGS 606
           W GK I  P+   +   +  T   E    +T  S+    F +GE+FD T+ + +I + +
Sbjct: 163 WTGKNITTPWDYYY---IYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNST 218


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 430 WFGKTIVIPFFVTFWEVLTDTEPQETRKNITRLSFRRYCFRKGEIFDTTLDSGSIRHGS 606
           W GK I  P+   +   +  T   E    +T  S+    F +GE+FD T+ + +I + +
Sbjct: 178 WTGKNITTPWDYYY---IYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNST 233


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 516 VFTSLLRFSVGKNFPKSHKKWYNYSFTEPN 427
           VFTS+    +  N  ++H +W++Y+F   N
Sbjct: 544 VFTSIASLLL-LNLSENHIEWFDYAFIPGN 572


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +1

Query: 463 VTFWEVLTDTEPQETRKNITRLSFRRYCFRKGEIFDTTLDSGSIRHGST 609
           + F   ++D++ QE  KNI       + F  G      + SGS   G++
Sbjct: 9   ILFLLAISDSQAQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSYIPGAS 57


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 244 FWECCVSLCAGTNQCLVYWM 303
           F  C V   AG N  L YW+
Sbjct: 73  FVGCLVMTFAGVNDLLGYWV 92


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 373 FYLFCQVILLTLVFVMLWVWF 435
           +YLF   I   L+ +M WV F
Sbjct: 246 YYLFHTYIPTCLIVIMSWVSF 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,467
Number of Sequences: 438
Number of extensions: 4045
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)