Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25c01
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058529-1|AAL13758.1|  226|Drosophila melanogaster LD23602p pro...    65   7e-11
AF296281-1|AAG17893.1|  226|Drosophila melanogaster survival mot...    65   7e-11
AE014296-2759|AAF49446.1|  226|Drosophila melanogaster CG16725-P...    65   7e-11
AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p pro...    42   0.001
AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-P...    42   0.001
AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p pro...    32   0.84 
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro...    30   3.4  
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P...    30   3.4  
AY069317-1|AAL39462.1|  232|Drosophila melanogaster LD03179p pro...    29   6.0  
AE014297-3446|AAF56226.1|  232|Drosophila melanogaster CG5986-PA...    29   6.0  

>AY058529-1|AAL13758.1|  226|Drosophila melanogaster LD23602p
           protein.
          Length = 226

 Score = 65.3 bits (152), Expect = 7e-11
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = +3

Query: 174 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 338
           VWDD  L   YD+++ +A   +A+R+A STN  E  N    + ++   S+    T     
Sbjct: 9   VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68

Query: 339 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 512
            +K G   RA Y  DG++YE  ++ +  +   CV+R+LGYEN + V L  L PS G   R
Sbjct: 69  SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127

Query: 513 TRQIEEALQDNGD 551
             Q   A +D  +
Sbjct: 128 REQFLIAKKDEDE 140


>AF296281-1|AAG17893.1|  226|Drosophila melanogaster survival motor
           neuron protein SMN protein.
          Length = 226

 Score = 65.3 bits (152), Expect = 7e-11
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = +3

Query: 174 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 338
           VWDD  L   YD+++ +A   +A+R+A STN  E  N    + ++   S+    T     
Sbjct: 9   VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68

Query: 339 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 512
            +K G   RA Y  DG++YE  ++ +  +   CV+R+LGYEN + V L  L PS G   R
Sbjct: 69  SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127

Query: 513 TRQIEEALQDNGD 551
             Q   A +D  +
Sbjct: 128 REQFLIAKKDEDE 140


>AE014296-2759|AAF49446.1|  226|Drosophila melanogaster CG16725-PA
           protein.
          Length = 226

 Score = 65.3 bits (152), Expect = 7e-11
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = +3

Query: 174 VWDDKKLNDAYDKALKMANAEVAKRVAMSTNT-EHGNKGKLKGKSRPTSSNKKETE---- 338
           VWDD  L   YD+++ +A   +A+R+A STN  E  N    + ++   S+    T     
Sbjct: 9   VWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV 68

Query: 339 -WKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKPSLGNEER 512
            +K G   RA Y  DG++YE  ++ +  +   CV+R+LGYEN + V L  L PS G   R
Sbjct: 69  SFKVGDYARATYV-DGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLPSWGKRVR 127

Query: 513 TRQIEEALQDNGD 551
             Q   A +D  +
Sbjct: 128 REQFLIAKKDEDE 140


>AY069766-1|AAL39911.1|  836|Drosophila melanogaster RE01471p
           protein.
          Length = 836

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 31/91 (34%), Positives = 40/91 (43%)
 Frame = +3

Query: 339 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKPSLGNEERTR 518
           W+ G  C A Y  DG  YEA I  V S+  CVV F+GY N E V    + P    + + R
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEITGV-SEKTCVVFFMGYGNHEEVLKVDILPI--TDAQNR 788

Query: 519 QIEEALQDNGDDGFGSQSPDLDRMQFGSDRG 611
            +  + Q         Q P L + Q    RG
Sbjct: 789 PLSNSAQQQ-QPHLQQQQPHLQQQQHSRYRG 818


>AE014296-2431|AAF49703.1|  836|Drosophila melanogaster CG13472-PA
           protein.
          Length = 836

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 31/91 (34%), Positives = 40/91 (43%)
 Frame = +3

Query: 339 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKPSLGNEERTR 518
           W+ G  C A Y  DG  YEA I  V S+  CVV F+GY N E V    + P    + + R
Sbjct: 732 WQKGDLCMAKYWDDGRYYEAEITGV-SEKTCVVFFMGYGNHEEVLKVDILPI--TDAQNR 788

Query: 519 QIEEALQDNGDDGFGSQSPDLDRMQFGSDRG 611
            +  + Q         Q P L + Q    RG
Sbjct: 789 PLSNSAQQQ-QPHLQQQQPHLQQQQHSRYRG 818


>AY061350-1|AAL28898.1|  243|Drosophila melanogaster LD28068p
           protein.
          Length = 243

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 339 WKAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALK 488
           WK G  C+A ++ D   Y+A I  + S  E  V F  Y+N     +N L+
Sbjct: 92  WKKGDKCQAKWKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELR 141


>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
          Length = 1872

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 228  NAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETE 338
            NA+     A+ST      KGK  GKS  + SN KETE
Sbjct: 1125 NAKKPASKAISTKDAKVEKGKETGKSVASKSNGKETE 1161


>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
            protein.
          Length = 1831

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 228  NAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETE 338
            NA+     A+ST      KGK  GKS  + SN KETE
Sbjct: 1123 NAKKPASKAISTKDAKVEKGKETGKSVASKSNGKETE 1159


>AY069317-1|AAL39462.1|  232|Drosophila melanogaster LD03179p
           protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 186 KKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETEW 341
           +K+NDA+++ LK A     K V  +T++    K     K++     KK T W
Sbjct: 154 EKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTK-AKKKKKGTLW 204


>AE014297-3446|AAF56226.1|  232|Drosophila melanogaster CG5986-PA
           protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 186 KKLNDAYDKALKMANAEVAKRVAMSTNTEHGNKGKLKGKSRPTSSNKKETEW 341
           +K+NDA+++ LK A     K V  +T++    K     K++     KK T W
Sbjct: 154 EKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTK-AKKKKKGTLW 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,815,906
Number of Sequences: 53049
Number of extensions: 456969
Number of successful extensions: 1452
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)