Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25b21
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein. 88 3e-17
BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1... 88 3e-17
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1... 88 3e-17
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1... 88 3e-17
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1... 88 3e-17
BC029687-1|AAH29687.1| 532|Homo sapiens DNA cross-link repair 1... 46 1e-04
AY849379-1|AAV97812.1| 532|Homo sapiens DNA cross-link repair 1... 46 1e-04
AL137856-10|CAI19076.1| 532|Homo sapiens DNA cross-link repair ... 46 1e-04
AK024060-1|BAB14807.1| 532|Homo sapiens protein ( Homo sapiens ... 46 1e-04
DQ063586-1|AAY64451.1| 656|Homo sapiens B-aggressive lymphoma 3... 31 3.2
BC101703-1|AAI01704.1| 444|Homo sapiens poly (ADP-ribose) polym... 31 3.2
BC101701-1|AAI01702.1| 444|Homo sapiens poly (ADP-ribose) polym... 31 3.2
AK097916-1|BAC05197.1| 444|Homo sapiens protein ( Homo sapiens ... 31 3.2
AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein. 31 5.6
AK172800-1|BAD18773.1| 746|Homo sapiens 7 (Trpm7). protein. 31 5.6
AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein. 31 5.6
BC022254-1|AAH22254.1| 434|Homo sapiens DCLRE1C protein protein. 30 7.4
AL360083-8|CAI40025.1| 434|Homo sapiens DNA cross-link repair 1... 30 7.4
AL360083-7|CAI40024.1| 692|Homo sapiens DNA cross-link repair 1... 30 7.4
AL160291-13|CAI16916.1| 294|Homo sapiens acyl-Coenzyme A bindin... 30 7.4
AL160291-11|CAI16914.1| 251|Homo sapiens acyl-Coenzyme A bindin... 30 7.4
AL160291-10|CAI16912.1| 534|Homo sapiens acyl-Coenzyme A bindin... 30 7.4
AJ296101-1|CAC37570.1| 692|Homo sapiens artemis protein protein. 30 7.4
BC110506-1|AAI10507.1| 695|Homo sapiens LMBR1 domain containing... 30 9.8
>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
Length = 1044
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +1
Query: 307 ESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLP 486
+ R K+ S++ RS +I TE+ V +KV+ + SAH G++ N +P
Sbjct: 638 QKKRCRKSNSLQEGACQKRSDH--LINTESEAVNLSKVKVFTKSAHG---GLQRGNKKIP 692
Query: 487 AKSKSNRTSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFN 666
SN ++ P +K + GT F VDAF YG + YFLTHFHSDHY GL K F
Sbjct: 693 --ESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFT 750
Query: 667 KQLFCSRITADLCISRLGV 723
++CS IT +L ++L V
Sbjct: 751 FPVYCSEITGNLLKNKLHV 769
>BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +1
Query: 307 ESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLP 486
+ R K+ S++ RS +I TE+ V +KV+ + SAH G++ N +P
Sbjct: 634 QKKRCRKSNSLQEGACQKRSDH--LINTESEAVNLSKVKVFTKSAHG---GLQRGNKKIP 688
Query: 487 AKSKSNRTSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFN 666
SN ++ P +K + GT F VDAF YG + YFLTHFHSDHY GL K F
Sbjct: 689 --ESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFT 746
Query: 667 KQLFCSRITADLCISRLGV 723
++CS IT +L ++L V
Sbjct: 747 FPVYCSEITGNLLKNKLHV 765
>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +1
Query: 307 ESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLP 486
+ R K+ S++ RS +I TE+ V +KV+ + SAH G++ N +P
Sbjct: 634 QKKRCRKSNSLQEGACQKRSDH--LINTESEAVNLSKVKVFTKSAHG---GLQRGNKKIP 688
Query: 487 AKSKSNRTSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFN 666
SN ++ P +K + GT F VDAF YG + YFLTHFHSDHY GL K F
Sbjct: 689 --ESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFT 746
Query: 667 KQLFCSRITADLCISRLGV 723
++CS IT +L ++L V
Sbjct: 747 FPVYCSEITGNLLKNKLHV 765
>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +1
Query: 307 ESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLP 486
+ R K+ S++ RS +I TE+ V +KV+ + SAH G++ N +P
Sbjct: 634 QKKRCRKSNSLQEGACQKRSDH--LINTESEAVNLSKVKVFTKSAHG---GLQRGNKKIP 688
Query: 487 AKSKSNRTSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFN 666
SN ++ P +K + GT F VDAF YG + YFLTHFHSDHY GL K F
Sbjct: 689 --ESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFT 746
Query: 667 KQLFCSRITADLCISRLGV 723
++CS IT +L ++L V
Sbjct: 747 FPVYCSEITGNLLKNKLHV 765
>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 87.8 bits (208), Expect = 3e-17
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +1
Query: 307 ESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLP 486
+ R K+ S++ RS +I TE+ V +KV+ + SAH G++ N +P
Sbjct: 634 QKKRCRKSNSLQEGACQKRSDH--LINTESEAVNLSKVKVFTKSAHG---GLQRGNKKIP 688
Query: 487 AKSKSNRTSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFN 666
SN ++ P +K + GT F VDAF YG + YFLTHFHSDHY GL K F
Sbjct: 689 --ESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFT 746
Query: 667 KQLFCSRITADLCISRLGV 723
++CS IT +L ++L V
Sbjct: 747 FPVYCSEITGNLLKNKLHV 765
>BC029687-1|AAH29687.1| 532|Homo sapiens DNA cross-link repair 1B
(PSO2 homolog, S. cerevisiae) protein.
Length = 532
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 544 IVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFNKQLFCSRITADLCISRLGV 723
++ T AVD +S + +FL+H HSDH GL ++ + L+CS ITA L L V
Sbjct: 5 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQV 64
Query: 724 N 726
+
Sbjct: 65 S 65
>AY849379-1|AAV97812.1| 532|Homo sapiens DNA cross-link repair 1B
(PSO2 homolog, S. cerevisiae) protein.
Length = 532
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 544 IVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFNKQLFCSRITADLCISRLGV 723
++ T AVD +S + +FL+H HSDH GL ++ + L+CS ITA L L V
Sbjct: 5 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQV 64
Query: 724 N 726
+
Sbjct: 65 S 65
>AL137856-10|CAI19076.1| 532|Homo sapiens DNA cross-link repair 1B
(PSO2 homolog, S. cerevisiae) protein.
Length = 532
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 544 IVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFNKQLFCSRITADLCISRLGV 723
++ T AVD +S + +FL+H HSDH GL ++ + L+CS ITA L L V
Sbjct: 5 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQV 64
Query: 724 N 726
+
Sbjct: 65 S 65
>AK024060-1|BAB14807.1| 532|Homo sapiens protein ( Homo sapiens
cDNA FLJ13998 fis, clone Y79AA1002229, weakly similar to
DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1. ).
Length = 532
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 544 IVAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFNKQLFCSRITADLCISRLGV 723
++ T AVD +S + +FL+H HSDH GL ++ + L+CS ITA L L V
Sbjct: 5 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQV 64
Query: 724 N 726
+
Sbjct: 65 S 65
>DQ063586-1|AAY64451.1| 656|Homo sapiens B-aggressive lymphoma 3
protein.
Length = 656
Score = 31.5 bits (68), Expect = 3.2
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 82 LLDATLNNGNFAST-KLKQKSIHDFLPKIVNVF--SLKGEDTNAD-QIENVASVRAMSKN 249
++DA ++ + ST LK + F P+++N+F S+K D +A ++ S+ +
Sbjct: 402 IIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP 461
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHV-QSAKVRN 426
D N + C V +S + R S + KI R + + QS +V+
Sbjct: 462 EHWTDMNHQLFCMVQLEPGQSEYNTIKDKFTRTCSSYAIE--KIERIQNAFLWQSYQVKK 519
Query: 427 ESASAHWPRKGIETLNF------SLPAKSKS--NRTSISPRSIPHHKIVAGTYFAVDA 576
K E L F S+P ++ NR+ ++ + K GTYFAVDA
Sbjct: 520 RQMDIKNDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGK---GTYFAVDA 574
>BC101703-1|AAI01704.1| 444|Homo sapiens poly (ADP-ribose)
polymerase family, member 15 protein.
Length = 444
Score = 31.5 bits (68), Expect = 3.2
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 82 LLDATLNNGNFAST-KLKQKSIHDFLPKIVNVF--SLKGEDTNAD-QIENVASVRAMSKN 249
++DA ++ + ST LK + F P+++N+F S+K D +A ++ S+ +
Sbjct: 190 IIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP 249
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHV-QSAKVRN 426
D N + C V +S + R S + KI R + + QS +V+
Sbjct: 250 EHWTDMNHQLFCMVQLEPGQSEYNTIKDKFTRTCSSYAIE--KIERIQNAFLWQSYQVKK 307
Query: 427 ESASAHWPRKGIETLNF------SLPAKSKS--NRTSISPRSIPHHKIVAGTYFAVDA 576
K E L F S+P ++ NR+ ++ + K GTYFAVDA
Sbjct: 308 RQMDIKNDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGK---GTYFAVDA 362
>BC101701-1|AAI01702.1| 444|Homo sapiens poly (ADP-ribose)
polymerase family, member 15 protein.
Length = 444
Score = 31.5 bits (68), Expect = 3.2
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 82 LLDATLNNGNFAST-KLKQKSIHDFLPKIVNVF--SLKGEDTNAD-QIENVASVRAMSKN 249
++DA ++ + ST LK + F P+++N+F S+K D +A ++ S+ +
Sbjct: 190 IIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP 249
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHV-QSAKVRN 426
D N + C V +S + R S + KI R + + QS +V+
Sbjct: 250 EHWTDMNHQLFCMVQLEPGQSEYNTIKDKFTRTCSSYAIE--KIERIQNAFLWQSYQVKK 307
Query: 427 ESASAHWPRKGIETLNF------SLPAKSKS--NRTSISPRSIPHHKIVAGTYFAVDA 576
K E L F S+P ++ NR+ ++ + K GTYFAVDA
Sbjct: 308 RQMDIKNDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGK---GTYFAVDA 362
>AK097916-1|BAC05197.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ40597 fis, clone THYMU2011118. ).
Length = 444
Score = 31.5 bits (68), Expect = 3.2
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 82 LLDATLNNGNFAST-KLKQKSIHDFLPKIVNVF--SLKGEDTNAD-QIENVASVRAMSKN 249
++DA ++ + ST LK + F P+++N+F S+K D +A ++ S+ +
Sbjct: 190 IIDAIVDFSSQHSTPSLKTVKVVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLP 249
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHV-QSAKVRN 426
D N + C V +S + R S + KI R + + QS +V+
Sbjct: 250 EHWTDMNHQLFCMVQLEPGQSEYNTIKDKFTRTCSSYAIE--KIERIQNAFLWQSYQVKK 307
Query: 427 ESASAHWPRKGIETLNF------SLPAKSKS--NRTSISPRSIPHHKIVAGTYFAVDA 576
K E L F S+P ++ NR+ ++ + K GTYFAVDA
Sbjct: 308 RQMDIKNDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGK---GTYFAVDA 362
>AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 5.6
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 73 KRRLLDATLNNGNFASTKLKQKSIHDFLPKIVNV-FSLKGEDTNADQIENVASVRAMSKN 249
KRR D T + T+ QK +HDF + V + F+ K + ++ E + +
Sbjct: 1147 KRRKKDKTSDGPKLFLTEEDQKKLHDFEEQCVEMYFNEKDDKFHSGSEERIRVTFERVEQ 1206
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNE 429
C+ + +V DR N RS++ S+ +I QD+ + +T +A+ +E
Sbjct: 1207 MCI------QIKEVGDRVNYIKRSLQ--SLDSQI--GHLQDLSALTVDTLKTLTAQKASE 1256
Query: 430 SASAH 444
++ H
Sbjct: 1257 ASKVH 1261
>AK172800-1|BAD18773.1| 746|Homo sapiens 7 (Trpm7). protein.
Length = 746
Score = 30.7 bits (66), Expect = 5.6
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 73 KRRLLDATLNNGNFASTKLKQKSIHDFLPKIVNV-FSLKGEDTNADQIENVASVRAMSKN 249
KRR D T + T+ QK +HDF + V + F+ K + ++ E + +
Sbjct: 28 KRRKKDKTSDGPKLFLTEEDQKKLHDFEEQCVEMYFNEKDDKFHSGSEERIRVTFERVEQ 87
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNE 429
C+ + +V DR N RS++ S+ +I QD+ + +T +A+ +E
Sbjct: 88 MCI------QIKEVGDRVNYIKRSLQ--SLDSQI--GHLQDLSALTVDTLKTLTAQKASE 137
Query: 430 SASAH 444
++ H
Sbjct: 138 ASKVH 142
>AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens
cDNA FLJ45904 fis, clone OCBBF3026361. ).
Length = 1063
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 241 SKNSCVGDTNRRTLCKVNDRNNESPRSVKT 330
S+N+ GD+ R CK D NN+S RSV T
Sbjct: 831 SENTDFGDSGRLYYCKHCDFNNKSARSVST 860
>AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein.
Length = 1864
Score = 30.7 bits (66), Expect = 5.6
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 73 KRRLLDATLNNGNFASTKLKQKSIHDFLPKIVNV-FSLKGEDTNADQIENVASVRAMSKN 249
KRR D T + T+ QK +HDF + V + F+ K + ++ E + +
Sbjct: 1147 KRRKKDKTSDGPKLFLTEEDQKKLHDFEEQCVEMYFNEKDDKFHSGSEERIRVTFERVEQ 1206
Query: 250 SCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNE 429
C+ + +V DR N RS++ S+ +I QD+ + +T +A+ +E
Sbjct: 1207 MCI------QIKEVGDRVNYIKRSLQ--SLDSQI--GHLQDLSALTVDTLKTLTAQKASE 1256
Query: 430 SASAH 444
++ H
Sbjct: 1257 ASKVH 1261
>BC022254-1|AAH22254.1| 434|Homo sapiens DCLRE1C protein protein.
Length = 434
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 565 AVDAFSYGDIPNVKHYFLTHFHSDHYTGLK-KSFNKQLFCS 684
++D F ++ + YFL+H H DH GL+ + ++L CS
Sbjct: 15 SIDRFDRENL-RARAYFLSHCHKDHMKGLRAPTLKRRLECS 54
>AL360083-8|CAI40025.1| 434|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 434
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 565 AVDAFSYGDIPNVKHYFLTHFHSDHYTGLK-KSFNKQLFCS 684
++D F ++ + YFL+H H DH GL+ + ++L CS
Sbjct: 15 SIDRFDRENL-RARAYFLSHCHKDHMKGLRAPTLKRRLECS 54
>AL360083-7|CAI40024.1| 692|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 692
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 565 AVDAFSYGDIPNVKHYFLTHFHSDHYTGLK-KSFNKQLFCS 684
++D F ++ + YFL+H H DH GL+ + ++L CS
Sbjct: 15 SIDRFDRENL-RARAYFLSHCHKDHMKGLRAPTLKRRLECS 54
>AL160291-13|CAI16916.1| 294|Homo sapiens acyl-Coenzyme A binding
domain containing 5 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 301 NNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFS 480
+ +S RS TS+R E IS +D+ + T TP+ ++ + ES+ + + E
Sbjct: 159 DKKSGRSSDITSVRLEKISKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEV 218
Query: 481 LPAKSKSNRTSISPRSIPHH--KIVAGTYFAVDAFSYGDIPNVKH 609
A+ N + +S H +++ + D F DI N H
Sbjct: 219 KGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGF-VQDIQNDIH 262
>AL160291-11|CAI16914.1| 251|Homo sapiens acyl-Coenzyme A binding
domain containing 5 protein.
Length = 251
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 301 NNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFS 480
+ +S RS TS+R E IS +D+ + T TP+ ++ + ES+ + + E
Sbjct: 117 DKKSGRSSDITSVRLEKISKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEV 176
Query: 481 LPAKSKSNRTSISPRSIPHH--KIVAGTYFAVDAFSYGDIPNVKH 609
A+ N + +S H +++ + D F DI N H
Sbjct: 177 KGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGF-VQDIQNDIH 220
>AL160291-10|CAI16912.1| 534|Homo sapiens acyl-Coenzyme A binding
domain containing 5 protein.
Length = 534
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 301 NNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFS 480
+ +S RS TS+R E IS +D+ + T TP+ ++ + ES+ + + E
Sbjct: 150 DKKSGRSSDITSVRLEKISKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEV 209
Query: 481 LPAKSKSNRTSISPRSIPHH--KIVAGTYFAVDAFSYGDIPNVKH 609
A+ N + +S H +++ + D F DI N H
Sbjct: 210 KGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGF-VQDIQNDIH 253
>AJ296101-1|CAC37570.1| 692|Homo sapiens artemis protein protein.
Length = 692
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 565 AVDAFSYGDIPNVKHYFLTHFHSDHYTGLK-KSFNKQLFCS 684
++D F ++ + YFL+H H DH GL+ + ++L CS
Sbjct: 15 SIDRFDRENL-RARAYFLSHCHKDHMKGLRAPTLKRRLECS 54
>BC110506-1|AAI10507.1| 695|Homo sapiens LMBR1 domain containing 2
protein.
Length = 695
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 547 VAGTYFAVDAFSYGDIPNVKHYFLTHFHSDHYTGLKKSFNKQLFCSRITADLCISRLGV 723
V T F + F+Y +Y +H +D Y+ L F+ LFC R+T LC++ LG+
Sbjct: 448 VYSTVFRIRVFNY-------YYLASHHQTDAYSLL---FSGMLFC-RLTPPLCLNFLGL 495
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.130 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,785,878
Number of Sequences: 237096
Number of extensions: 2150296
Number of successful extensions: 4665
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4665
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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