Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25b13
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 37 7e-05
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 41 0.001
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434... 40 0.002
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 33 0.18
02_01_0286 + 1921049-1921726 31 0.97
10_01_0150 + 1747424-1747758,1748097-1748103 30 1.7
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 29 3.9
06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117 29 3.9
11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 28 6.9
11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 28 6.9
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960... 28 6.9
02_05_0073 - 25602268-25603182,25603273-25604190 28 6.9
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 27 9.1
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 27 9.1
01_01_0363 + 2850954-2853675,2853819-2854225 27 9.1
>03_06_0300 +
32967935-32968029,32968975-32969077,32969175-32969244,
32969464-32969581,32969687-32969744,32969831-32969895,
32969990-32969996,32970087-32970147,32970757-32970776,
32970858-32970923,32971126-32971293,32971372-32971629,
32972098-32972310,32972824-32973099
Length = 525
Score = 36.7 bits (81), Expect(2) = 7e-05
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 463 GILMWSEIFKATLDDGEKVAIILLDTQGAFDS--ESTVRDCATVFALSTMLSSV 618
GI +W + +D G KV+++ LDT+G F+S +S V D +FAL+T+LSSV
Sbjct: 90 GIWIWGTPVEMDID-GSKVSVLYLDTEG-FESVGKSNVYD-DRIFALATVLSSV 140
Score = 27.1 bits (57), Expect(2) = 7e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 283 VVVISVAGAFRKGKSFLLDFFL 348
+ V+ V G +R GKSFLL+ L
Sbjct: 62 IAVVGVIGPYRSGKSFLLNQLL 83
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/133 (30%), Positives = 59/133 (44%)
Frame = +1
Query: 220 FTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXX 399
F +D EA+ +L L + V V+SV G R+GKSF+L+ L
Sbjct: 47 FVMDPEAVAALQLVKG----PVGVVSVCGRARQGKSFVLNQLLGRS-------------- 88
Query: 400 XXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDC 579
GF T G+ MWS K T DG + ++LLDT+G + T
Sbjct: 89 -------SGFQVAPTHRPCTKGLWMWSAPLKRTGLDGTEYNLVLLDTEGIDAYDQTGTYS 141
Query: 580 ATVFALSTMLSSV 618
+F+L+ +LSS+
Sbjct: 142 IQIFSLAVLLSSM 154
>07_01_0584 +
4345134-4345237,4346165-4346267,4346397-4346466,
4346552-4346590,4346684-4346801,4346894-4346951,
4347031-4347095,4347281-4347341,4347678-4347779,
4348005-4348070,4348399-4348443,4348540-4348797,
4349289-4349501,4350103-4350411,4350461-4350613
Length = 587
Score = 39.9 bits (89), Expect = 0.002
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +1
Query: 208 PDHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXX 387
PDH T A + L + + + + ++V G +R GKSFLL+ L K
Sbjct: 41 PDHGHTKLRLAKEGLEAIKRI-ETPIAAVAVIGPYRSGKSFLLNQLLSLTCNK------- 92
Query: 388 XXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDS--E 561
GF + T GI +W + + +G KV+++ LDT+G F+S +
Sbjct: 93 ------------GFGVGHMRDTKTKGIWVWGTPIELDV-NGSKVSVLYLDTEG-FESIGK 138
Query: 562 STVRDCATVFALSTMLSSV 618
S V D +FAL+T+LSS+
Sbjct: 139 SNVYD-DRIFALATVLSSI 156
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -1
Query: 338 SNKKDFPFLKAPATDITTTALSXTSSFRSRDLRASSSRVNVWSGPVSTTWTPCGPRGAGA 159
SN P + P +T A S +SS S +S+S WS PV+T+ G GA
Sbjct: 15 SNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSSTSCSAAWSLPVATSAGRRGLLALGA 74
Query: 158 GF 153
GF
Sbjct: 75 GF 76
>02_01_0286 + 1921049-1921726
Length = 225
Score = 30.7 bits (66), Expect = 0.97
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 87 LKNTQRNCRSMMT*SDDGTCDREAGAGTAWAARCP--GRRHRPRPYVHPGRGGPQVSAPE 260
+K +R R ++DG D AG T AA GRRHR GRGG
Sbjct: 119 VKRRRRRGRGCTCEAEDG--DGTAGRHTGEAAEAAGGGRRHRIETRA-TGRGGAATGRRG 175
Query: 261 RRCXRQSRGR 290
RR R++ GR
Sbjct: 176 RRLKRENGGR 185
>10_01_0150 + 1747424-1747758,1748097-1748103
Length = 113
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +3
Query: 156 AGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRGRYISCRS 308
AGAG A CP PR R P+ P R+C GR I CR+
Sbjct: 68 AGAG---AVACPPTS--PRLTAASARAPPRTCLPHRQCPEVQPGRSIRCRN 113
>07_03_1553 -
27653473-27653490,27653634-27653673,27653852-27653939,
27654150-27654230,27654644-27655084,27655692-27656325
Length = 433
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 291 NDHGSVXDIFFQEQRLEGLLVQGERMVGAGVDDLDTV 181
++ G V + F+E+ + GE+ GAG D+L T+
Sbjct: 116 SEKGDVFEEIFKEEAATAAVASGEKAPGAGADELWTL 152
>06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117
Length = 457
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 159 GAGTAWAARCPGRRHRPRPYVHPGRGG-PQVSAPE 260
G GTA A CP P P P GG P S P+
Sbjct: 29 GNGTAAPATCPATPPSPPPTSKPATGGEPAASCPD 63
>11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008
Length = 1058
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 445 SERDTTGILMWSEIFKATLDDGEKVAIILLDTQ 543
+E + G+ + ++FK LDDG VAI +L+ Q
Sbjct: 750 NEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQ 782
>11_08_0032 -
27807489-27807497,27807641-27807684,27808046-27808168,
27810770-27810983,27811382-27811530,27811719-27812618,
27812964-27814659
Length = 1044
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 445 SERDTTGILMWSEIFKATLDDGEKVAIILLDTQ 543
+E + G+ + ++FK LDDG VAI +L+ Q
Sbjct: 695 NEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQ 727
>09_02_0466 +
9599389-9599662,9600324-9600643,9600950-9601186,
9601278-9601445,9601778-9601966
Length = 395
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = -1
Query: 257 RSRDLRASSSRV------NVWSGPVSTTWTPCGPRGAGAGFSVTCAII 132
R R R+SSSR+ + W P P P GAG + T II
Sbjct: 54 RRRRRRSSSSRLLGPDIPDTWDSPPRAAARPSPPSGAGVDYDSTATII 101
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 138 GTCDREAGAGTAWAARCPGRR-HRPRPYVHPGRGGPQVSAPERRCXRQSRGRYIS 299
G+ +R +G G+ A+R PGRR P P G E R RQ G+ +S
Sbjct: 171 GSRERSSGGGSRRASRSPGRRAEGVSPAPAPAGSGGGGGGGE-RVVRQQPGKMVS 224
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 148 TEKPAPAPRGPHGVQVVDTGPDHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKS 327
+++ P PR P+ + P H F L E LK + D+ + +S GA+ G+
Sbjct: 10 SQQQQPRPRAPYAIPEWSAAPGHPFFL--EVLKD----GTIVDK--LDVSRKGAYMFGRI 61
Query: 328 FLLDFFLRY 354
L DF L +
Sbjct: 62 DLCDFVLEH 70
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 454 DTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRD 576
DT+GILM+ + DG + + GA D+E+T+ D
Sbjct: 97 DTSGILMFDTSGNLVILDGRGSSFTVAYGSGAKDTEATILD 137
>01_01_0363 + 2850954-2853675,2853819-2854225
Length = 1042
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 445 SERDTTGILMWSEIFKATL-DDGEKVAIILLDTQGAFDSESTVRDC 579
SE + G + ++K TL D+GE VAI + D + S S +C
Sbjct: 722 SEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAEC 767
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,754
Number of Sequences: 37544
Number of extensions: 329285
Number of successful extensions: 1304
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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