Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25b13
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-bind... 173 4e-43
BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A (... 171 1e-42
AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein. 171 2e-42
AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens ... 170 3e-42
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 170 3e-42
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 170 3e-42
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 170 3e-42
BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein p... 169 7e-42
AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens ... 168 2e-41
AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens ... 152 8e-37
CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein. 113 4e-25
AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein. 113 4e-25
AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein. 113 4e-25
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 55 2e-07
BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179... 46 8e-05
AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein pr... 46 8e-05
AK125756-1|BAC86276.1| 290|Homo sapiens protein ( Homo sapiens ... 32 1.4
AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant pr... 32 1.9
U15177-1|AAA75509.1| 404|Homo sapiens unknown protein. 31 3.3
BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated pl... 31 3.3
AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated pl... 31 3.3
AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated pl... 31 3.3
AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated pl... 31 3.3
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 31 4.3
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 31 4.3
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 31 4.3
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 31 4.3
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 31 4.3
D13640-1|BAA02803.2| 480|Homo sapiens KIAA0015 protein. 30 5.7
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 7.6
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 7.6
AF016693-1|AAB71686.1| 236|Homo sapiens small intestinal mucin ... 30 7.6
>AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-binding
protein protein.
Length = 558
Score = 173 bits (421), Expect = 4e-43
Identities = 90/158 (56%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Frame = +1
Query: 148 TEKPAPAPR-GPHGVQVVDTGPDHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGK 324
+E+ P + GP VQV+ DH+F LDE AL +LL E V D+ VV +SVAGAFRKGK
Sbjct: 23 SEEEEPVKKAGP--VQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 325 SFLLDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLD 504
SFL+DF LRYM+ + +PL GFSWRGGSER+TTGI +WSEIF
Sbjct: 81 SFLMDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKP 135
Query: 505 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
DG+KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 136 DGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 173
>BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A
(autosomal dominant) protein.
Length = 558
Score = 171 bits (417), Expect = 1e-42
Identities = 89/158 (56%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Frame = +1
Query: 148 TEKPAPAPR-GPHGVQVVDTGPDHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGK 324
+E+ P + GP VQV+ +H+F LDE AL +LL E V D+ VV +SVAGAFRKGK
Sbjct: 23 SEEEEPVKKAGP--VQVLIVKDEHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 325 SFLLDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLD 504
SFL+DF LRYM+ + +PL GFSWRGGSER+TTGI +WSEIF
Sbjct: 81 SFLMDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKP 135
Query: 505 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
DG+KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 136 DGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 173
>AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein.
Length = 558
Score = 171 bits (416), Expect = 2e-42
Identities = 89/158 (56%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
Frame = +1
Query: 148 TEKPAPAPR-GPHGVQVVDTGPDHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGK 324
+E+ P + GP VQV+ DH+F LDE AL +LL E V D+ VV +SVAGAFRKGK
Sbjct: 23 SEEEEPVKKAGP--VQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 325 SFLLDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLD 504
SFL+DF LRYM+ + +PL GFSWRGGSER+ TGI +WSEIF
Sbjct: 81 SFLMDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSEREATGIQIWSEIFLINKP 135
Query: 505 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
DG+KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 136 DGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 173
>AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23293 fis, clone HEP10514. ).
Length = 579
Score = 170 bits (414), Expect = 3e-42
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +1
Query: 211 DHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXX 390
DH F LDEEAL+ +LL+E + D +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 70 DHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK-----DSQ 124
Query: 391 XXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTV 570
+PL GF+WRGG ER+TTGI +W+E+F +G KVA++L+DTQGAFDS+ST+
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTI 184
Query: 571 RDCATVFALSTMLSSV 618
+DCATVFALSTM SSV
Sbjct: 185 KDCATVFALSTMTSSV 200
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 170 bits (414), Expect = 3e-42
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +1
Query: 211 DHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXX 390
DH F LDEEAL+ +LL+E + D +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 70 DHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK-----DSQ 124
Query: 391 XXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTV 570
+PL GF+WRGG ER+TTGI +W+E+F +G KVA++L+DTQGAFDS+ST+
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTI 184
Query: 571 RDCATVFALSTMLSSV 618
+DCATVFALSTM SSV
Sbjct: 185 KDCATVFALSTMTSSV 200
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 170 bits (414), Expect = 3e-42
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +1
Query: 211 DHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXX 390
DH F LDEEAL+ +LL+E + D +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 70 DHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK-----DSQ 124
Query: 391 XXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTV 570
+PL GF+WRGG ER+TTGI +W+E+F +G KVA++L+DTQGAFDS+ST+
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTI 184
Query: 571 RDCATVFALSTMLSSV 618
+DCATVFALSTM SSV
Sbjct: 185 KDCATVFALSTMTSSV 200
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 170 bits (414), Expect = 3e-42
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +1
Query: 211 DHTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXX 390
DH F LDEEAL+ +LL+E + D +VV+SVAGAFRKGKSFLLDF LRYM+ K
Sbjct: 70 DHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNK-----DSQ 124
Query: 391 XXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTV 570
+PL GF+WRGG ER+TTGI +W+E+F +G KVA++L+DTQGAFDS+ST+
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTI 184
Query: 571 RDCATVFALSTMLSSV 618
+DCATVFALSTM SSV
Sbjct: 185 KDCATVFALSTMTSSV 200
>BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein
protein.
Length = 541
Score = 169 bits (411), Expect = 7e-42
Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Frame = +1
Query: 178 PHGVQVVDTGPD-HTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRY 354
P VQVV D H+F LDE+AL S+LL++ + D VVV+SVAGAFRKGKSF+LDF LRY
Sbjct: 24 PGPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRY 83
Query: 355 MHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILL 534
++ + +PL GFSWRGGS+ +TTGI +WSE+F G+KVA++L+
Sbjct: 84 LYSQ--KESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLM 141
Query: 535 DTQGAFDSESTVRDCATVFALSTMLSSV 618
DTQGAFDS+STV+DCAT+FALSTM SSV
Sbjct: 142 DTQGAFDSQSTVKDCATIFALSTMTSSV 169
>AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
).
Length = 541
Score = 168 bits (408), Expect = 2e-41
Identities = 85/148 (57%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
Frame = +1
Query: 178 PHGVQVVDTGPD-HTFTLDEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRY 354
P VQVV D H+F LDE+AL S LL++ + D VVV+SVAGAFRKGKSF+LDF LRY
Sbjct: 24 PGPVQVVLVQKDQHSFELDEKALASTLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRY 83
Query: 355 MHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILL 534
++ + +PL GFSWRGGS+ +TTGI +WSE+F G+KVA++L+
Sbjct: 84 LYSQ--KESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLM 141
Query: 535 DTQGAFDSESTVRDCATVFALSTMLSSV 618
DTQGAFDS+STV+DCAT+FALSTM SSV
Sbjct: 142 DTQGAFDSQSTVKDCATIFALSTMTSSV 169
>AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ40269 fis, clone TESTI2026597. ).
Length = 567
Score = 152 bits (369), Expect = 8e-37
Identities = 73/130 (56%), Positives = 95/130 (73%)
Frame = +1
Query: 229 DEEALKSLLLKEDVXDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXXX 408
D+ S+LL++ + D VVV+SVAGAFRKGKSF+LDF LRY++ +
Sbjct: 68 DDAMESSILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQ--KESGHSNWLGDP 125
Query: 409 XDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATV 588
+PL GFSWRGGS+ +TTGI +WSE+F G+KVA++L+DTQGAFDS+STV+DCAT+
Sbjct: 126 EEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKDCATI 185
Query: 589 FALSTMLSSV 618
FALSTM SSV
Sbjct: 186 FALSTMTSSV 195
>CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein.
Length = 475
Score = 113 bits (273), Expect = 4e-25
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = +1
Query: 334 LDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGE 513
+DF LRYM+ + +PL GFSWRGGSER+TTGI +WSEIF DG+
Sbjct: 1 MDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 514 KVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 90
>AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein.
Length = 475
Score = 113 bits (273), Expect = 4e-25
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = +1
Query: 334 LDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGE 513
+DF LRYM+ + +PL GFSWRGGSER+TTGI +WSEIF DG+
Sbjct: 1 MDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 514 KVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 90
>AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein.
Length = 475
Score = 113 bits (273), Expect = 4e-25
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = +1
Query: 334 LDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSERDTTGILMWSEIFKATLDDGE 513
+DF LRYM+ + +PL GFSWRGGSER+TTGI +WSEIF DG+
Sbjct: 1 MDFMLRYMYNQ-----ESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGK 55
Query: 514 KVAIILLDTQGAFDSESTVRDCATVFALSTMLSSV 618
KVA++L+DTQG FDS+ST+RD ATVFALSTM+SS+
Sbjct: 56 KVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI 90
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 532 LDTQGAFDSESTVRDCATVFALSTMLSSV 618
+DTQGAFDS+ST++DCATVFALSTM SSV
Sbjct: 1 MDTQGAFDSQSTIKDCATVFALSTMTSSV 29
>BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179
protein.
Length = 631
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/114 (33%), Positives = 52/114 (45%)
Frame = +1
Query: 274 DRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSER 453
D V +++V G GKSFLL+ L+ + LQG W G+
Sbjct: 166 DTPVCLLAVLGEQHSGKSFLLNHLLQGLP---GLESGEGGRPRGGEASLQGCRW--GANG 220
Query: 454 DTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSS 615
GI MWS F +G+KVA+ L+DT A E + + AL+TMLSS
Sbjct: 221 LARGIWMWSHPFLLG-KEGKKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSS 273
>AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein
protein.
Length = 632
Score = 46.4 bits (105), Expect = 8e-05
Identities = 38/114 (33%), Positives = 52/114 (45%)
Frame = +1
Query: 274 DRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXXXXDPLQGFSWRGGSER 453
D V +++V G GKSFLL+ L+ + LQG W G+
Sbjct: 166 DTPVCLLAVLGEQHSGKSFLLNHLLQGLP---GLESGEGGRPRGGEASLQGCRW--GANG 220
Query: 454 DTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSS 615
GI MWS F +G+KVA+ L+DT A E + + AL+TMLSS
Sbjct: 221 LARGIWMWSHPFLLG-KEGKKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSS 273
>AK125756-1|BAC86276.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ43768 fis, clone TESTI2049422. ).
Length = 290
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 150 REAGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRGRYISCRS 308
R AGA AW R PGR P P GR G + R C R + R C++
Sbjct: 162 RPAGAARAWERR-PGRGCTPGPGGGRGRAGAEPGGSRRAC-RHTGPRQAPCQA 212
>AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant
protein.
Length = 303
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 189 PGRRHRPRPYVHPGRGGPQVSAPERRCXRQSR 284
PGRR R R PGRGGP + + + R R R
Sbjct: 9 PGRRGRRRRTERPGRGGPALGSQDSRGSRVRR 40
>U15177-1|AAA75509.1| 404|Homo sapiens unknown protein.
Length = 404
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 150 REAGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRC 269
R AGA A GRRH+ P+ P R P + R C
Sbjct: 96 RPAGATRTGAPPAEGRRHKAAPHNGPARRSPPCNPAPRSC 135
>BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysin 1 protein.
Length = 1627
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 156 AGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRG 287
AG T GRR P P PG V P RR R++RG
Sbjct: 42 AGPATCATRAARGRRASPPPPPPPGGAWEAVRVPRRRQQREARG 85
>AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysinadenine nucleotide
translocato protein.
Length = 1627
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 156 AGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRG 287
AG T GRR P P PG V P RR R++RG
Sbjct: 42 AGPATCATRAARGRRASPPPPPPPGGAWEAVRVPRRRQQREARG 85
>AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysinmolog A (yeast) (TIMM17A)
pseu protein.
Length = 1627
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 156 AGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRG 287
AG T GRR P P PG V P RR R++RG
Sbjct: 42 AGPATCATRAARGRRASPPPPPPPGGAWEAVRVPRRRQQREARG 85
>AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysin) (TERF1) pseudogene
protein.
Length = 1627
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 156 AGAGTAWAARCPGRRHRPRPYVHPGRGGPQVSAPERRCXRQSRG 287
AG T GRR P P PG V P RR R++RG
Sbjct: 42 AGPATCATRAARGRRASPPPPPPPGGAWEAVRVPRRRQQREARG 85
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 RRHRPRPYVHPG--RGGPQVSAPERRCXRQSRGRYISCRSLQERKVLLIGLLP 347
RR P P PG R GP + A + R+ +G R LQ+ LLI LP
Sbjct: 14 RRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLP 66
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 RRHRPRPYVHPG--RGGPQVSAPERRCXRQSRGRYISCRSLQERKVLLIGLLP 347
RR P P PG R GP + A + R+ +G R LQ+ LLI LP
Sbjct: 14 RRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLP 66
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 RRHRPRPYVHPG--RGGPQVSAPERRCXRQSRGRYISCRSLQERKVLLIGLLP 347
RR P P PG R GP + A + R+ +G R LQ+ LLI LP
Sbjct: 14 RRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLP 66
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 RRHRPRPYVHPG--RGGPQVSAPERRCXRQSRGRYISCRSLQERKVLLIGLLP 347
RR P P PG R GP + A + R+ +G R LQ+ LLI LP
Sbjct: 14 RRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLP 66
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 RRHRPRPYVHPG--RGGPQVSAPERRCXRQSRGRYISCRSLQERKVLLIGLLP 347
RR P P PG R GP + A + R+ +G R LQ+ LLI LP
Sbjct: 14 RRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLP 66
>D13640-1|BAA02803.2| 480|Homo sapiens KIAA0015 protein.
Length = 480
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 165 GTAWAARCPGRRHRPRPYVHPGRGGPQVSAP 257
G AW CPG PR + G PQ S+P
Sbjct: 7 GEAWRPSCPGLAAGPRDALGMSSGAPQKSSP 37
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.9 bits (64), Expect = 7.6
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -1
Query: 608 SIVDRANTVAQSRTVDSLSKAPCVSSNIIATFSPSSSVALNISDHMSMPVVSLSE 444
SI TVA S ++SLS P V+S + T+S +SS + +D SM + SE
Sbjct: 1518 SIPVSTTTVASSE-INSLSTTPAVTSTPVTTYSQASS-SPTTADGTSMQTSTYSE 1570
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.9 bits (64), Expect = 7.6
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -1
Query: 608 SIVDRANTVAQSRTVDSLSKAPCVSSNIIATFSPSSSVALNISDHMSMPVVSLSE 444
SI TVA S ++SLS P V+S + T+S +SS + +D SM + SE
Sbjct: 1518 SIPVSTTTVASSE-INSLSTTPAVTSTPVTTYSQASS-SPTTADGTSMQTSTYSE 1570
>AF016693-1|AAB71686.1| 236|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 236
Score = 29.9 bits (64), Expect = 7.6
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -1
Query: 608 SIVDRANTVAQSRTVDSLSKAPCVSSNIIATFSPSSSVALNISDHMSMPVVSLSE 444
SI TVA S ++SLS P V+S + T+S +SS + +D SM + SE
Sbjct: 172 SIPVSTTTVASSE-INSLSTTPAVTSTPVTTYSQASS-SPTTADGTSMQTSTYSE 224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,177,995
Number of Sequences: 237096
Number of extensions: 1710488
Number of successful extensions: 9401
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 8900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9388
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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