Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25b10
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...   119   2e-27
Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical p...    44   1e-04
Z81493-7|CAE46664.1|  342|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z81493-8|CAB04043.1|  305|Caenorhabditis elegans Hypothetical pr...    40   0.002
AC024859-7|AAK29968.1|  550|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z36238-8|CAH04738.1|  448|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z36238-7|CAA85278.2|  506|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical ...    28   6.0  

>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score =  119 bits (286), Expect = 2e-27
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
 Frame = +3

Query: 198 VAVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSV-TCGRNLNIEFRSIVDNFLI 374
           V  LP++  +     + + F N    P N +Y+  +S +V + GR+L++  +S       
Sbjct: 24  VIFLPILVYFLPRYTQFIFFLNFRRLP-NTDYNDLASNNVKSIGRSLHLPGKSG------ 76

Query: 375 RLGIWHILPNS---EIKDVADLKTNNTFHEL-KNSRNPVILYCHGNSNHRASPHRLKIYS 542
           R+G+WHILPN    E +      T   F ++ ++S N +I Y HGNS  R   HR+++Y+
Sbjct: 77  RIGVWHILPNKLSLEWRTEGKHPTERDFDDMMRDSENQIIFYAHGNSFDRTFYHRVEMYN 136

Query: 543 VFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSL 722
           +  + N+HVV FDYRGYGDS +  PTE+G+VED   VY WL +      +  V VWGHS+
Sbjct: 137 LLSDCNYHVVCFDYRGYGDS-EGTPTEKGIVEDTKTVYEWLKENCG---KTPVIVWGHSM 192

Query: 723 GTAV 734
           GT V
Sbjct: 193 GTGV 196


>Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical
           protein K04G2.2 protein.
          Length = 332

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = +3

Query: 480 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 659
           +L+ HGN+          +Y +   LN +V ++DY GYG ST  KP+E+ +  D+   + 
Sbjct: 115 LLFSHGNAVDLGQMTSF-LYGLGFHLNCNVFSYDYSGYGCSTG-KPSEKNLYADITAAFE 172

Query: 660 WLLKTLDLEEEPTVFVWGHSLGT 728
            L     + +E  + ++G S+GT
Sbjct: 173 LLKSEFGVPKE-KIILYGQSIGT 194


>Z81493-7|CAE46664.1|  342|Caenorhabditis elegans Hypothetical
           protein F01D5.7b protein.
          Length = 342

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +3

Query: 441 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 608
           N + +     N V+L+C  +S    S   P+ +  +S F  L    V  FDY GYG S+ 
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168

Query: 609 VKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGT 728
            + +E+ +  D+  VY  +LKT     +  + V G+S+GT
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT---RPDKKIVVIGYSIGT 204


>Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical
           protein F01D5.7a protein.
          Length = 335

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +3

Query: 441 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 608
           N + +     N V+L+C  +S    S   P+ +  +S F  L    V  FDY GYG S+ 
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168

Query: 609 VKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGT 728
            + +E+ +  D+  VY  +LKT     +  + V G+S+GT
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT---RPDKKIVVIGYSIGT 204


>Z81493-8|CAB04043.1|  305|Caenorhabditis elegans Hypothetical
           protein F01D5.8 protein.
          Length = 305

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +3

Query: 477 VILYCHGNSNHRAS---PHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLF 647
           V+L+C  NS+       P+ +   +        +  FDY GYG S+  +  E+ V  D+ 
Sbjct: 79  VVLFCQPNSSDLGGFLQPNSMNFVTYANVFETDLYAFDYSGYGFSSGTQG-EKNVYADVR 137

Query: 648 HVYSWLLKTLDLEEEPTVFVWGHSLGT 728
            VY    K L++  +  + V G+S+GT
Sbjct: 138 AVYE---KILEMRPDKKIVVMGYSIGT 161


>AC024859-7|AAK29968.1|  550|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.13 protein.
          Length = 550

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
 Frame = +3

Query: 390 HILPNSEIKDVADLKTNNTFHELKNSRN----PVILYCHGNSNHRASPHRLKIYSVFQEL 557
           H+L         D  T N F  +   +N    PVILY HG      S H+    S+ Q L
Sbjct: 84  HVLSPKTSPQSEDNLTLNIFTPVWTPKNETGFPVILYIHGGGFVSDSAHKYGDMSICQHL 143

Query: 558 ---NFHVVTFDYR----GYGDSTKVKPTERGVVEDLFHVYSWLLKTLDL-EEEP-TVFVW 710
              +  VVT  YR    G+  +      +   + D+     W+ + + L   +P  + + 
Sbjct: 144 VTKDVVVVTIQYRLGFLGFWTTGDSSIPDNVALHDMVFALKWVKENIGLFNGDPNNITLM 203

Query: 711 GHSLGTA 731
           G S G A
Sbjct: 204 GQSAGGA 210


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 214 RGSTATWNTRTPAVSEAPVAKRSPKTMLRRKYST 113
           RGSTA   TR P  + AP A R+P    R   +T
Sbjct: 298 RGSTAAPGTRAPPATRAPPATRAPPATTRAPPAT 331


>Z36238-8|CAH04738.1|  448|Caenorhabditis elegans Hypothetical
           protein R74.8b protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 213 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 338
           LM R  K    ++V +  + +P  + YD  S   + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227


>Z36238-7|CAA85278.2|  506|Caenorhabditis elegans Hypothetical
           protein R74.8a protein.
          Length = 506

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 213 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 338
           LM R  K    ++V +  + +P  + YD  S   + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227


>AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical
           protein Y54G2A.38 protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 418 SLISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQ 308
           S++  F SI Q+  + + LSTIERN +   L    +Q
Sbjct: 195 SIVCNFLSIMQLKLMKKNLSTIERNLLFSTLASSVIQ 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,486,526
Number of Sequences: 27780
Number of extensions: 306589
Number of successful extensions: 1063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)