Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25b09
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 92 4e-19
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 92 4e-19
Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical p... 32 0.43
Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical p... 32 0.43
Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical pr... 32 0.43
U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.7
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 29 2.3
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 29 2.3
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 29 2.3
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 29 2.3
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 27 9.2
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +2
Query: 404 GRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSE-AKDGA 580
GR WIH PD L+ GHV Y+ +FLGC + + G +V ++AI ++F + LK+SE ++ A
Sbjct: 44 GRTWIHPPDYLINGHVEYVARFLGCVETPKANGSDVAREAIHAIRFQRDLKRSEQTRETA 103
Query: 581 KCKKVEITISVDGVAIQEPRSNNIMYQFPL 670
K +KVEI IS+D V I + ++ MY FPL
Sbjct: 104 KLQKVEIRISIDNVIIADIKTKAPMYTFPL 133
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +2
Query: 404 GRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSE-AKDGA 580
GR WIH PD L+ GHV Y+ +FLGC + + G +V ++AI ++F + LK+SE ++ A
Sbjct: 44 GRTWIHPPDYLINGHVEYVARFLGCVETPKANGSDVAREAIHAIRFQRDLKRSEQTRETA 103
Query: 581 KCKKVEITISVDGVAIQEPRSNNIMYQFPL 670
K +KVEI IS+D V I + ++ MY FPL
Sbjct: 104 KLQKVEIRISIDNVIIADIKTKAPMYTFPL 133
>Z49968-11|CAN86616.1| 492|Caenorhabditis elegans Hypothetical
protein M110.5d protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/74 (21%), Positives = 41/74 (55%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAI 628
++Y K +G VD+ +G + +A++ + + K+ GA ++ + I++DG+ +
Sbjct: 52 ISYKGKLIGEQDVDKARGDAMCAEAMRT---AKSIIKAA---GAHKTRITLQINIDGIKV 105
Query: 629 QEPRSNNIMYQFPL 670
+ +S +++ FP+
Sbjct: 106 LDEKSGAVLHNFPV 119
>Z49968-10|CAB54270.3| 490|Caenorhabditis elegans Hypothetical
protein M110.5a protein.
Length = 490
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/74 (21%), Positives = 41/74 (55%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAI 628
++Y K +G VD+ +G + +A++ + + K+ GA ++ + I++DG+ +
Sbjct: 52 ISYKGKLIGEQDVDKARGDAMCAEAMRT---AKSIIKAA---GAHKTRITLQINIDGIKV 105
Query: 629 QEPRSNNIMYQFPL 670
+ +S +++ FP+
Sbjct: 106 LDEKSGAVLHNFPV 119
>Z49968-9|CAB54271.3| 492|Caenorhabditis elegans Hypothetical
protein M110.5b protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/74 (21%), Positives = 41/74 (55%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAI 628
++Y K +G VD+ +G + +A++ + + K+ GA ++ + I++DG+ +
Sbjct: 52 ISYKGKLIGEQDVDKARGDAMCAEAMRT---AKSIIKAA---GAHKTRITLQINIDGIKV 105
Query: 629 QEPRSNNIMYQFPL 670
+ +S +++ FP+
Sbjct: 106 LDEKSGAVLHNFPV 119
>Z49968-6|CAB54272.2| 474|Caenorhabditis elegans Hypothetical
protein M110.5c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/74 (21%), Positives = 41/74 (55%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAI 628
++Y K +G VD+ +G + +A++ + + K+ GA ++ + I++DG+ +
Sbjct: 36 ISYKGKLIGEQDVDKARGDAMCAEAMRT---AKSIIKAA---GAHKTRITLQINIDGIKV 89
Query: 629 QEPRSNNIMYQFPL 670
+ +S +++ FP+
Sbjct: 90 LDEKSGAVLHNFPV 103
>U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical
protein F19C7.3 protein.
Length = 310
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 42 HHH*NNINNSWPSLVQR 92
+HH NI N WPSLVQR
Sbjct: 15 NHHEYNIKNPWPSLVQR 31
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 621 TPSTDIVISTFLHFAPSFASDFFSCCVNCSFLI 523
T S I+ ST LHF PS F + V C+ +I
Sbjct: 154 TSSDSILFSTSLHFDPSIVELFMAFHVGCTLII 186
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 621 TPSTDIVISTFLHFAPSFASDFFSCCVNCSFLI 523
T S I+ ST LHF PS F + V C+ +I
Sbjct: 154 TSSDSILFSTSLHFDPSIVELFMAFHVGCTLII 186
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 467 FLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAIQEPR 640
FLG TQV + GIE++ +A+ +L + ++ D + + V+G I E R
Sbjct: 411 FLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAPSTIAIVEVNGQQIAECR 468
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 467 FLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAIQEPR 640
FLG TQV + GIE++ +A+ +L + ++ D + + V+G I E R
Sbjct: 388 FLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAPSTIAIVEVNGQQIAECR 445
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 467 FLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAIQEPR 640
FLG TQV + GIE++ +A+ +L + ++ D + + V+G I E R
Sbjct: 550 FLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAPSTIAIVEVNGQQIAECR 607
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 467 FLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVAIQEPR 640
FLG TQV + GIE++ +A+ +L + ++ D + + V+G I E R
Sbjct: 499 FLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAPSTIAIVEVNGQQIAECR 556
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQP-KGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVA 625
+ + K++G ++ +P IE+V A++++++ + + G K + V+IT+SVDGV
Sbjct: 34 IHFEAKYVGSMEIPRPGTRIEIVA-AMRRVRYEFKAR------GIKKRPVDITVSVDGVK 86
Query: 626 I 628
+
Sbjct: 87 V 87
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 449 VAYLVKFLGCTQVDQP-KGIEVVKDAIKKLQFTQQLKKSEAKDGAKCKKVEITISVDGVA 625
+ + K++G ++ +P IE+V A++++++ + + G K + V+IT+SVDGV
Sbjct: 34 IHFEAKYVGSMEIPRPGTRIEIVA-AMRRVRYEFKAR------GIKKRPVDITVSVDGVK 86
Query: 626 I 628
+
Sbjct: 87 V 87
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 502 HRGGQRCNQETTVHTATEEVRSERWREMQES 594
HRGG+R + + EEVRS R M ++
Sbjct: 217 HRGGERERRHSLPRVIIEEVRSRRGSRMSQT 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,385,654
Number of Sequences: 27780
Number of extensions: 281088
Number of successful extensions: 887
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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