Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25b06
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CBEE9 Cluster: hypothetical protein TTHERM_0030...    36   1.00 
UniRef50_UPI00006CE57E Cluster: cation channel family protein; n...    34   3.0  
UniRef50_Q6MLQ8 Cluster: PurB protein; n=1; Bdellovibrio bacteri...    34   4.0  
UniRef50_UPI0000498BA9 Cluster: cullin; n=1; Entamoeba histolyti...    33   5.3  
UniRef50_A5INI0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q55W77 Cluster: Putative uncharacterized protein; n=2; ...    33   7.0  
UniRef50_Q558Z6 Cluster: C2H2 type Zn finger-containing protein;...    33   9.3  
UniRef50_Q24G83 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  
UniRef50_Q8SQL8 Cluster: DNA REPLICATION LICENSING FACTOR OF THE...    33   9.3  

>UniRef50_UPI00006CBEE9 Cluster: hypothetical protein
           TTHERM_00305600; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00305600 - Tetrahymena
           thermophila SB210
          Length = 1849

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
 Frame = +1

Query: 220 KEESYAERRQLFKDIWITASNMDLKDNEVTTKP--RVIKTLRLDDIDRSIAGKKKKERIK 393
           K ++  ++ Q+  +++  +S  D K+ +  TK    + KT  ++DI      +KK  +  
Sbjct: 553 KSDTKQKKYQIKSEVYSNSSESDTKEKKTVTKKIQGIKKTQYVEDIGSKSKTQKKNLKEN 612

Query: 394 NLRAVCNKILEFCDRQDADDI 456
           N + V +KI E  D+QD + +
Sbjct: 613 NKKLVASKIQEDEDQQDLNPL 633


>UniRef50_UPI00006CE57E Cluster: cation channel family protein; n=1;
            Tetrahymena thermophila SB210|Rep: cation channel family
            protein - Tetrahymena thermophila SB210
          Length = 2297

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +1

Query: 292  KDNEVTTK-PRVIKTLRLDDIDRSIAGKKKKERIKNLRA-----VCNKILEFCDRQDADD 453
            K NE+  K   +IK +RL DI RSI  K +   +KN++      + +K  +F D Q  + 
Sbjct: 1344 KQNEIVPKLVEIIKKIRLIDISRSIIQKTRARMLKNMKTHQYEFINDKSQDFSDLQKGNK 1403

Query: 454  ILYHQVVEDDHSPCSKEI 507
            +L  + +        +EI
Sbjct: 1404 LLQKRYLMQKEKQYLEEI 1421


>UniRef50_Q6MLQ8 Cluster: PurB protein; n=1; Bdellovibrio
           bacteriovorus|Rep: PurB protein - Bdellovibrio
           bacteriovorus
          Length = 418

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = +1

Query: 193 LLFIMEGMTKEESYAERRQLFKDIWITASNMDLKDNEVTTKPRVIKTLRLDDIDRSIAGK 372
           L  I +GM +EE+YA  ++L   +   +    LKD ++    ++ K L+  +ID    GK
Sbjct: 350 LALIQKGMIREEAYALVQRLCHSL---SYGEHLKD-KLLVDDQIQKLLKPKEIDEIFTGK 405

Query: 373 KKKERIKNL 399
           K K+ IK++
Sbjct: 406 KHKKAIKDI 414


>UniRef50_UPI0000498BA9 Cluster: cullin; n=1; Entamoeba histolytica
           HM-1:IMSS|Rep: cullin - Entamoeba histolytica HM-1:IMSS
          Length = 741

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = +1

Query: 253 FKDIWITASNMDLKDNEVTTKPRVIKTLRLDDIDRSIAGKKKKERIKNLRAVCNKILEFC 432
           FKD  IT   +DL D +    PR++       + +    +  +E++K       K+L+F 
Sbjct: 363 FKDALITNKIVDLSDKKDEVFPRILANYSHMLLKKGSKIEPDQEKVKENIVKLGKVLQFV 422

Query: 433 DRQDADDILYHQVVED 480
             +D  +++Y +  +D
Sbjct: 423 GNRDVFEMVYQKNFQD 438


>UniRef50_A5INI0 Cluster: Putative uncharacterized protein; n=1;
           Thermotoga petrophila RKU-1|Rep: Putative
           uncharacterized protein - Thermotoga petrophila RKU-1
          Length = 1123

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 268 ITASNMDLKDNEVTTKPRVIKTLRLDDIDRSIAGKKKKERIKNLRAVCNKILEF 429
           IT+S+  L   EV T+   IK    D IDR + G++KKE    +RA  N+ +EF
Sbjct: 523 ITSSS--LHSREVETEKNKIKN-EYDTIDRILNGEQKKELQDTIRASVNRDVEF 573


>UniRef50_Q55W77 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 575

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +1

Query: 292 KDNEVTTKPRVIKTLRLDDIDRSIAGKKKKERIKN 396
           +D  +++ P+VIK + +DD D  + G+K KER ++
Sbjct: 120 EDQIISSDPKVIKHVLIDDFDNFVKGQKFKERAQD 154


>UniRef50_Q558Z6 Cluster: C2H2 type Zn finger-containing protein;
           n=2; Dictyostelium discoideum|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 121

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 592 LNCEKKLIHSNKKSRHTSPIKKSCC 666
           + C K+  HS+ ++RH + +K SCC
Sbjct: 12  IGCGKEFAHSSSRTRHQNSVKHSCC 36


>UniRef50_Q24G83 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 536

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +1

Query: 328 KTLRLDDIDRSIAGKKKKERIKNLRAVCNKILEFCDRQDADDILYHQVVEDDHSPCSK 501
           KT+ + +ID S+     + RI   RA+ +K + + D   A+D+   Q  +++ + C +
Sbjct: 239 KTILMTEIDESVLKWMNRRRIFKARAIIHKSILYQDYGSAEDLEESQQCQEEDAECQE 296


>UniRef50_Q8SQL8 Cluster: DNA REPLICATION LICENSING FACTOR OF THE
           MCM FAMILY MCM7; n=1; Encephalitozoon cuniculi|Rep: DNA
           REPLICATION LICENSING FACTOR OF THE MCM FAMILY MCM7 -
           Encephalitozoon cuniculi
          Length = 694

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 19/74 (25%), Positives = 36/74 (48%)
 Frame = +1

Query: 220 KEESYAERRQLFKDIWITASNMDLKDNEVTTKPRVIKTLRLDDIDRSIAGKKKKERIKNL 399
           KE  Y   R L   I ++ ++  L+ +    +  V + LRL ++ R    +K++E + + 
Sbjct: 573 KESPYVTPRYLLSLIRLSLAHCRLRLSTDVNEDDVNEALRLMEVTRIPVPRKRREEVSSK 632

Query: 400 RAVCNKILEFCDRQ 441
           RA+ N IL     +
Sbjct: 633 RAIYNLILSLAGEE 646


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,784,862
Number of Sequences: 1657284
Number of extensions: 11408355
Number of successful extensions: 27236
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27222
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)