Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25b06
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330,385...    32   0.40 
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875...    29   2.8  
08_01_0273 - 2203828-2204124,2204812-2205072,2205161-2205296,220...    29   4.9  
07_03_0515 + 18992296-18993720                                         28   8.5  

>08_01_0438 +
           3852221-3853207,3853544-3854757,3855258-3855330,
           3856715-3856843,3857060-3857103,3857186-3857265,
           3857342-3857396,3857712-3857919
          Length = 929

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 361 IAGKKKKERIKNLRAVCNKILEFCDRQDADDILYHQVVEDDH 486
           +AGKK ++R  ++R  CN +LE   R D+  I+   V E +H
Sbjct: 148 VAGKKTRKRPASIREGCNAMLEVLRRGDSKWIVTKLVKEHNH 189


>02_05_0602 +
           30283893-30284170,30286259-30286305,30286534-30287510,
           30287611-30287920,30288561-30290197
          Length = 1082

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +1

Query: 322 VIKTLRLDDIDRSIAGKKKKERIKNLRAVCNKILEFCDRQDADDILYHQVVE 477
           ++ T+R++D D  IA +K  E +KNL   C+K +++       + L   +VE
Sbjct: 487 ILTTMRINDSDDPIAAQKAGEVLKNLEK-CSKNIKYMAESGYLEPLQSHLVE 537


>08_01_0273 -
           2203828-2204124,2204812-2205072,2205161-2205296,
           2205438-2205656,2206130-2206323,2206339-2206505,
           2206862-2207132,2207740-2207784
          Length = 529

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = +1

Query: 211 GMTKEESYAERRQLFKDIWI 270
           G+TKEE+YA+ R+L ++ W+
Sbjct: 453 GITKEEAYAKLRELVEESWM 472


>07_03_0515 + 18992296-18993720
          Length = 474

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = +1

Query: 274 ASNMDLKDNEVTTKPRVIKTLRLDDIDRSIAGKKKKERIKNLRAVCNKILEFCDRQDADD 453
           A  +D K N       V + +R   +  S  G+K +E+   ++AVC K +E      + D
Sbjct: 404 AMKVDRKRNNFVEASEVERAVR-SLMGGSEEGRKAREKAAEMKAVCRKAVE---EGGSSD 459

Query: 454 ILYHQVVED 480
           +  H++ E+
Sbjct: 460 MAVHKLYEE 468


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,552,269
Number of Sequences: 37544
Number of extensions: 296758
Number of successful extensions: 596
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)