Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25b04
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    83   1e-16
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    67   1e-11
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    27   8.7  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    27   8.7  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    27   8.7  

>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 52/135 (38%), Positives = 71/135 (52%)
 Frame = +3

Query: 231 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 410
           + KQI  E+ AS  YL+M  YF  D V  P  AK F + + EEREHAT+L+    +RG  
Sbjct: 16  VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG-- 73

Query: 411 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 590
            G V  L   + P N  W +   A E AL LE     S+ ++  T   + ND HL D++ 
Sbjct: 74  -GRVV-LQDIQKPENDEWGTALKAFEAALALEKFNNESLLKLHSTA-GNHNDAHLTDFIE 130

Query: 591 GEFLDEQYKGQRDLA 635
            ++LDEQ K   + A
Sbjct: 131 EKYLDEQVKSINEFA 145


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 45/135 (33%), Positives = 67/135 (49%)
 Frame = +3

Query: 231 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 410
           + KQI  E+ AS  YL+M A+F  D +     AK F + + EER HAT+L+    +RG  
Sbjct: 16  VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRG-- 73

Query: 411 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 590
            G V  +   + P    W +   A E AL LE     S+ ++    E   ND HL +Y+ 
Sbjct: 74  -GRVA-MQNIQKPEKDEWGTVLEAFEAALALERANNASLLKLHGIAEQR-NDAHLTNYIQ 130

Query: 591 GEFLDEQYKGQRDLA 635
            ++L+EQ     + A
Sbjct: 131 EKYLEEQVHSINEFA 145


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 30/124 (24%), Positives = 42/124 (33%)
 Frame = +2

Query: 233 EETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCCD*RTRARDQAH*LPAHEGKAD 412
           +  D  G  R N    H      R+  PPR      R    +  AR      PA E +  
Sbjct: 203 DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPKRDAR------PAREIRDS 256

Query: 413 RLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVR 592
           R          PR+     +  SP A P   + + ++ P G      + +   P R   R
Sbjct: 257 REPREVRRSPPPRRAASPRKASSPSA-PAKNDRKRERSPSGSVAPSVRRESASPPRRRAR 315

Query: 593 GIPR 604
            IPR
Sbjct: 316 IIPR 319


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 30/124 (24%), Positives = 42/124 (33%)
 Frame = +2

Query: 233 EETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCCD*RTRARDQAH*LPAHEGKAD 412
           +  D  G  R N    H      R+  PPR      R    +  AR      PA E +  
Sbjct: 203 DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPKRDAR------PAREIRDS 256

Query: 413 RLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVR 592
           R          PR+     +  SP A P   + + ++ P G      + +   P R   R
Sbjct: 257 REPREVRRSPPPRRAASPRKASSPSA-PAKNDRKRERSPSGSVAPSVRRESASPPRRRAR 315

Query: 593 GIPR 604
            IPR
Sbjct: 316 IIPR 319


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 30/124 (24%), Positives = 42/124 (33%)
 Frame = +2

Query: 233 EETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCCD*RTRARDQAH*LPAHEGKAD 412
           +  D  G  R N    H      R+  PPR      R    +  AR      PA E +  
Sbjct: 203 DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPKRDAR------PAREIRDS 256

Query: 413 RLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVR 592
           R          PR+     +  SP A P   + + ++ P G      + +   P R   R
Sbjct: 257 REPREVRRSPPPRRAASPRKASSPSA-PAKNDRKRERSPSGSVAPSVRRESASPPRRRAR 315

Query: 593 GIPR 604
            IPR
Sbjct: 316 IIPR 319


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 30/124 (24%), Positives = 42/124 (33%)
 Frame = +2

Query: 233 EETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCCD*RTRARDQAH*LPAHEGKAD 412
           +  D  G  R N    H      R+  PPR      R    +  AR      PA E +  
Sbjct: 203 DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPKRDAR------PAREIRDS 256

Query: 413 RLRNRPHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVR 592
           R          PR+     +  SP A P   + + ++ P G      + +   P R   R
Sbjct: 257 REPREVRRSPPPRRAASPRKASSPSA-PAKNDRKRERSPSGSVAPSVRRESASPPRRRAR 315

Query: 593 GIPR 604
            IPR
Sbjct: 316 IIPR 319


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 89  SYNHRFFDDTQKNMRS*KQ*LYKSSLY 9
           SYNHRFF    K++ S K+ LYK+ ++
Sbjct: 99  SYNHRFF--IHKDISSDKKFLYKNDIF 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,072,089
Number of Sequences: 27780
Number of extensions: 269211
Number of successful extensions: 778
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)