Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25b02
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.2  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/14 (42%), Positives = 14/14 (100%)
 Frame = +1

Query: 100 LKMYMFLFSYVSVT 141
           L++++++F+Y+SVT
Sbjct: 133 LQLFLYIFTYLSVT 146


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 299 TSAAVSVSGWRILIARTASTT 361
           TSAA  V GW++    +  TT
Sbjct: 58  TSAAADVDGWQVTPLPSDGTT 78


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 445 HVLYYCFLILI 477
           H+L+YC LI++
Sbjct: 225 HLLFYCVLIIL 235


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 317 PRPPPMYIGHF 285
           P PPP+Y  H+
Sbjct: 163 PPPPPVYTHHY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,516
Number of Sequences: 336
Number of extensions: 2336
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)