BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25b02
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070388-1|AAH70388.1| 78|Homo sapiens chromosome 1 open readi... 47 3e-05
AL031727-3|CAI19017.1| 78|Homo sapiens chromosome 1 open readi... 47 3e-05
BC009726-1|AAH09726.1| 317|Homo sapiens protease, serine, 22 pr... 29 6.9
AY358396-1|AAQ88762.1| 334|Homo sapiens PRSS22 protein. 29 6.9
AF321182-1|AAG35070.1| 317|Homo sapiens serine protease PRSS22 ... 29 6.9
AC003965-1|AAB93671.1| 271|Homo sapiens SP001LA protein. 29 6.9
AB010779-1|BAB20263.1| 317|Homo sapiens brain-specific serine p... 29 6.9
>BC070388-1|AAH70388.1| 78|Homo sapiens chromosome 1 open reading
frame 151 protein.
Length = 78
Score = 47.2 bits (107), Expect = 3e-05
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 190 RYSACFVDFGLKTVTGLLIGSMMG-SFFLRGYKKWPMYIGGGLGFGMAYSNCENSLN-DY 363
++ C D +K TG +G + +FF R + WP+ G G+G GMAYSNC++ Y
Sbjct: 9 KWDRCLADAVVKIGTGFGLGIVFSLTFFKR--RMWPLAFGSGMGLGMAYSNCQHDFQAPY 66
Query: 364 LL 369
LL
Sbjct: 67 LL 68
>AL031727-3|CAI19017.1| 78|Homo sapiens chromosome 1 open reading
frame 151 protein.
Length = 78
Score = 47.2 bits (107), Expect = 3e-05
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 190 RYSACFVDFGLKTVTGLLIGSMMG-SFFLRGYKKWPMYIGGGLGFGMAYSNCENSLN-DY 363
++ C D +K TG +G + +FF R + WP+ G G+G GMAYSNC++ Y
Sbjct: 9 KWDRCLADAVVKIGTGFGLGIVFSLTFFKR--RMWPLAFGSGMGLGMAYSNCQHDFQAPY 66
Query: 364 LL 369
LL
Sbjct: 67 LL 68
>BC009726-1|AAH09726.1| 317|Homo sapiens protease, serine, 22
protein.
Length = 317
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = -3
Query: 315 ETAADVHWPFLVASQEETTHHAA--------Y*EPCHCFQSEINE 205
E + D WP++V+ Q+ THH A HCF+ +N+
Sbjct: 54 EDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNK 98
>AY358396-1|AAQ88762.1| 334|Homo sapiens PRSS22 protein.
Length = 334
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = -3
Query: 315 ETAADVHWPFLVASQEETTHHAA--------Y*EPCHCFQSEINE 205
E + D WP++V+ Q+ THH A HCF+ +N+
Sbjct: 71 EDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNK 115
>AF321182-1|AAG35070.1| 317|Homo sapiens serine protease PRSS22
protein.
Length = 317
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = -3
Query: 315 ETAADVHWPFLVASQEETTHHAA--------Y*EPCHCFQSEINE 205
E + D WP++V+ Q+ THH A HCF+ +N+
Sbjct: 54 EDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNK 98
>AC003965-1|AAB93671.1| 271|Homo sapiens SP001LA protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = -3
Query: 315 ETAADVHWPFLVASQEETTHHAA--------Y*EPCHCFQSEINE 205
E + D WP++V+ Q+ THH A HCF+ +N+
Sbjct: 8 EDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNK 52
>AB010779-1|BAB20263.1| 317|Homo sapiens brain-specific serine
protease-4 protein.
Length = 317
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = -3
Query: 315 ETAADVHWPFLVASQEETTHHAA--------Y*EPCHCFQSEINE 205
E + D WP++V+ Q+ THH A HCF+ +N+
Sbjct: 54 EDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNK 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,530,322
Number of Sequences: 237096
Number of extensions: 1330433
Number of successful extensions: 2108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -