Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a17
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118880-1|AAM50740.1|  388|Drosophila melanogaster HL01222p pro...    47   2e-05
AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA...    47   2e-05
X96601-1|CAA65421.1|  962|Drosophila melanogaster vinculin protein.    29   7.6  

>AY118880-1|AAM50740.1|  388|Drosophila melanogaster HL01222p
           protein.
          Length = 388

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 164 AQADQICYAVLCVFSYFAAGQEQKK 238
           + +DQICY+VLCVFSY AAGQ+QKK
Sbjct: 63  SMSDQICYSVLCVFSYVAAGQDQKK 87


>AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA
            protein.
          Length = 2075

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 164  AQADQICYAVLCVFSYFAAGQEQKK 238
            + +DQICY+VLCVFSY AAGQ+QKK
Sbjct: 1750 SMSDQICYSVLCVFSYVAAGQDQKK 1774


>X96601-1|CAA65421.1|  962|Drosophila melanogaster vinculin protein.
          Length = 962

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 516 MLPVRRMPPPSGGDEDDAV 460
           + PVRR PPP   DED+ V
Sbjct: 764 LAPVRRPPPPETDDEDEGV 782


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,474,092
Number of Sequences: 53049
Number of extensions: 325132
Number of successful extensions: 751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)