Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a16
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    31   0.008
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.0  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +1

Query: 283 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 462
           D+  L+TGANSG+G  + +CL   G  V+           + +    KP  L   + +L+
Sbjct: 7   DEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQCDLS 66

Query: 463 SLRSVRK 483
           +   + K
Sbjct: 67  NQNDILK 73


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 265 KGLDLKDKTCLI--TGANSGVGLEMTKCLNLCGCTVLM 372
           KGL LK    +I  T  N+G+GL M   +    C ++M
Sbjct: 92  KGL-LKPGCTIIEPTSGNTGIGLAMAAAVRGYKCIIVM 128


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 148 NLILNDKVRAFSSSKVKSLVE---NYFDLNFRIHGPTGEEVTK 267
           N  + D+     S++++ +V    N+ D+NFRI G   +E+ +
Sbjct: 368 NKPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIR 410


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 514 FFLYLKDHQSIFAQI 470
           +F  LKDHQ  FA++
Sbjct: 123 YFSSLKDHQHQFAEL 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,394
Number of Sequences: 438
Number of extensions: 4092
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)