Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a13
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.38 
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   6.2  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +3

Query: 192 HVSCKLTGRVKTEIATMLGHKINPNKIKNVCTLLRRVNTLKHLCNNNRTINSF-IKRNE 365
           H  CKL  R   ++       +   K +N  T  R     K+LC   R I  F ++R++
Sbjct: 273 HNRCKLAEREMKDLEKPKTEAVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERDQ 331


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 622 DKSVSSLPTMHCVSP*ASRSSKNLDRREYCTQPHMTTLSPTFLGLNSP 479
           DK  +S+P   C+S     S+   +RR    +  + ++    L  NSP
Sbjct: 64  DKGAASMPKTECMSECILNSTGIYNRRGDVDEKKLNSVFTDSLPANSP 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,025
Number of Sequences: 2352
Number of extensions: 12206
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)