Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a08
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113588-1|AAM29593.1|  117|Drosophila melanogaster RH40423p pro...    97   3e-20
AE014296-3120|AAN11658.1|  117|Drosophila melanogaster CG14084-P...    97   3e-20
AE014296-3119|AAF49180.1|  117|Drosophila melanogaster CG14084-P...    97   3e-20
BT011107-1|AAR82774.1|  250|Drosophila melanogaster LP02760p pro...    34   0.17 
AE014296-2762|AAF49443.1|  232|Drosophila melanogaster CG4109-PA...    34   0.17 
AY061069-1|AAL28617.1|  284|Drosophila melanogaster LD03592p pro...    34   0.22 
AE013599-3697|AAF47071.1|  284|Drosophila melanogaster CG11173-P...    34   0.22 

>AY113588-1|AAM29593.1|  117|Drosophila melanogaster RH40423p
           protein.
          Length = 117

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
 Frame = +2

Query: 296 REGYHYQPV------PRVATEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLL 457
           R  Y YQP+      P  A+ D +E ENE+ AEEL  KI +LK ++I++GNEVR Q+KLL
Sbjct: 3   RNNYPYQPLNQHPSGPHPASHDALEAENEQAAEELKQKIGALKSLTIDIGNEVRYQDKLL 62

Query: 458 RGLDDDVDRSSGFLGKTMGRVLRLGK 535
           RG+DDD+DR+SGFLG  M RV+RL K
Sbjct: 63  RGIDDDMDRTSGFLGNAMTRVVRLAK 88


>AE014296-3120|AAN11658.1|  117|Drosophila melanogaster CG14084-PB,
           isoform B protein.
          Length = 117

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
 Frame = +2

Query: 296 REGYHYQPV------PRVATEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLL 457
           R  Y YQP+      P  A+ D +E ENE+ AEEL  KI +LK ++I++GNEVR Q+KLL
Sbjct: 3   RNNYPYQPLNQHPSGPHPASHDALEAENEQAAEELKQKIGALKSLTIDIGNEVRYQDKLL 62

Query: 458 RGLDDDVDRSSGFLGKTMGRVLRLGK 535
           RG+DDD+DR+SGFLG  M RV+RL K
Sbjct: 63  RGIDDDMDRTSGFLGNAMTRVVRLAK 88


>AE014296-3119|AAF49180.1|  117|Drosophila melanogaster CG14084-PA,
           isoform A protein.
          Length = 117

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
 Frame = +2

Query: 296 REGYHYQPV------PRVATEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLL 457
           R  Y YQP+      P  A+ D +E ENE+ AEEL  KI +LK ++I++GNEVR Q+KLL
Sbjct: 3   RNNYPYQPLNQHPSGPHPASHDALEAENEQAAEELKQKIGALKSLTIDIGNEVRYQDKLL 62

Query: 458 RGLDDDVDRSSGFLGKTMGRVLRLGK 535
           RG+DDD+DR+SGFLG  M RV+RL K
Sbjct: 63  RGIDDDMDRTSGFLGNAMTRVVRLAK 88


>BT011107-1|AAR82774.1|  250|Drosophila melanogaster LP02760p
           protein.
          Length = 250

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +2

Query: 341 DTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDR 484
           + +  +NE + E LS  +S  + ++ +LGNEV DQ  +L  L + +DR
Sbjct: 163 EMLAQQNEGL-EVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDR 209


>AE014296-2762|AAF49443.1|  232|Drosophila melanogaster CG4109-PA
           protein.
          Length = 232

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +2

Query: 341 DTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDR 484
           + +  +NE + E LS  +S  + ++ +LGNEV DQ  +L  L + +DR
Sbjct: 145 EMLAQQNEGL-EVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDR 191


>AY061069-1|AAL28617.1|  284|Drosophila melanogaster LD03592p
           protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +2

Query: 311 YQPVPRVATEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLD---DDVD 481
           YQP  + A  +  + + +   EE+   +S LK ++ +LG E+  Q +LL  ++   +DVD
Sbjct: 211 YQPQRQAA--NPFQAQIDSNLEEMCSNLSVLKMLATDLGGEIESQNELLDNMNYKIEDVD 268

Query: 482 RSSGFLGKTMGRVLR 526
                  K M ++L+
Sbjct: 269 LKIHKQNKDMSKLLK 283


>AE013599-3697|AAF47071.1|  284|Drosophila melanogaster CG11173-PA
           protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +2

Query: 311 YQPVPRVATEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLD---DDVD 481
           YQP  + A  +  + + +   EE+   +S LK ++ +LG E+  Q +LL  ++   +DVD
Sbjct: 211 YQPQRQAA--NPFQAQIDSNLEEMCSNLSVLKMLATDLGGEIESQNELLDNMNYKIEDVD 268

Query: 482 RSSGFLGKTMGRVLR 526
                  K M ++L+
Sbjct: 269 LKIHKQNKDMSKLLK 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,711,069
Number of Sequences: 53049
Number of extensions: 592377
Number of successful extensions: 1452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)