Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a04
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC090999-12|ABD63206.1|  257|Caenorhabditis elegans Hypothetical...    28   5.9  

>Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical
           protein R09A8.3 protein.
          Length = 817

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -2

Query: 601 SVAAHGIIMYCQGGWSGEKYFDTMSLM 521
           +V   G +++C GG++G K+ DT+ L+
Sbjct: 750 AVVTAGNVIFCIGGFNGVKFLDTIELL 776


>AC090999-12|ABD63206.1|  257|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.23 protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = -3

Query: 315 FHRRSDYLSRPVVR**SPDSDYFRCVSSNVLTVSVLMN 202
           F+++S+YL R ++R    D D+F  +S  ++ +  ++N
Sbjct: 171 FNKQSEYLDRFMLRSNYLDQDFFENISEQIIKIEGIVN 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,272
Number of Sequences: 27780
Number of extensions: 341637
Number of successful extensions: 796
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)