Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a01
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.6  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   5.6  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     22   7.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   7.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.8  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    22   9.8  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 162 SQYEHQITKHAIDQIP 115
           S+YEH +++HA   +P
Sbjct: 472 SRYEHHLSRHASSILP 487


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 162 SQYEHQITKHAIDQIP 115
           S+YEH +++HA   +P
Sbjct: 448 SRYEHHLSRHASSILP 463


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 72  FFRKNGNYAVVETHEEF 122
           FF K GN  V E + EF
Sbjct: 261 FFEKKGNATVWENYAEF 277


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 126 DQIPRVSRRPRNFHFYGKSLKLLN*TEDEI 37
           +QIP V +     H   K ++L++ T+D++
Sbjct: 904 EQIPSVEQLKGKIHTTEKRIRLVSATQDKL 933


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 362 ETIKLSPHKLSMMANCARYTKVK 294
           + +KLS H+L M+    +YT  K
Sbjct: 918 QRVKLSAHQLEMVNCFVKYTFTK 940


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 386 WNLCSHNHETIKLSPHKLSMMANCAR-YTK 300
           W  CS+NH  I+   + L++   C R Y K
Sbjct: 21  WRACSNNHGMIR--KYGLNICRQCFREYAK 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,496
Number of Sequences: 2352
Number of extensions: 7127
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)