Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a01
         (404 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical pr...    29   0.96 
Z72517-6|CAA96696.3|  261|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z68113-1|CAA92151.1|  321|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AC006761-4|AAL32243.1|  498|Caenorhabditis elegans Hypothetical ...    27   6.8  
AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical ...    27   6.8  
U80955-10|AAN65297.2|  475|Caenorhabditis elegans Hypothetical p...    26   9.0  

>Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical
           protein K09A9.4 protein.
          Length = 716

 Score = 29.5 bits (63), Expect = 0.96
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 383 NLCSHNHETIKLSPHKLSMMANCARYTKVKQFLT 282
           ++  HNH  I     K  +   C  YT VK+FLT
Sbjct: 123 HMAVHNHPPILYHDRKSILCTRCMVYTPVKRFLT 156


>Z72517-6|CAA96696.3|  261|Caenorhabditis elegans Hypothetical
           protein T28F4.6 protein.
          Length = 261

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +2

Query: 167 SIIISSQYDEIML----MFLEKNIHIYTHKNIHIQIHICIKEKLETVLLLYNAHNLPSWK 334
           ++++ S  D I+     +FL    H +T  + ++ IH+ +K+ LE   +L     L  + 
Sbjct: 182 ALLLESTNDNIVYHCLRIFLSLANHSFTRVSFNVYIHLFLKKALENEGMLNTTKVLQIYS 241

Query: 335 VYEVI 349
           + E+I
Sbjct: 242 IREII 246


>Z68113-1|CAA92151.1|  321|Caenorhabditis elegans Hypothetical
           protein E03G2.1 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 277 FNAYMYLYMYIFVCIYMYIFF-QKH*HYF 194
           F AY+Y+Y+YI+V   +YIF  Q H   F
Sbjct: 82  FCAYIYIYIYIYV-YGLYIFIAQSHKQIF 109


>AC006761-4|AAL32243.1|  498|Caenorhabditis elegans Hypothetical
           protein Y41G9A.4a protein.
          Length = 498

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 280 FFNAYMYLYMYIFVCIYMYIFFQKH*HYFII 188
           ++   ++  + I  C+++Y+F QKH    II
Sbjct: 418 YYPTILFAVLGIAACVFIYLFTQKHHERLII 448


>AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical
           protein Y41G9A.4b protein.
          Length = 860

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 280 FFNAYMYLYMYIFVCIYMYIFFQKH*HYFII 188
           ++   ++  + I  C+++Y+F QKH    II
Sbjct: 418 YYPTILFAVLGIAACVFIYLFTQKHHERLII 448


>U80955-10|AAN65297.2|  475|Caenorhabditis elegans Hypothetical
           protein T04C9.1c protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 392 ELWNLCSHNHETIKLSPHKLSMMANCARYTKVKQFL 285
           +++ +  H+H+T+  SP K ++      + K   FL
Sbjct: 18  QMYAMAQHHHQTMGASPRKFNITDGLRSFHKASAFL 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,460,177
Number of Sequences: 27780
Number of extensions: 157180
Number of successful extensions: 419
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)