Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25a01
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.33 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.0  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              20   9.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    20   9.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 14/67 (20%), Positives = 27/67 (40%)
 Frame = +2

Query: 158 CDESIIISSQYDEIMLMFLEKNIHIYTHKNIHIQIHICIKEKLETVLLLYNAHNLPSWKV 337
           C++  +IS    EI +   E+ I I     +  + H+C    L         + + + ++
Sbjct: 356 CEDERVISIPDKEITVPSNEETIDINNGAELMQETHVCFFSLLRDAFTSKGEYRMSTGEM 415

Query: 338 YEVIV*W 358
            E I  W
Sbjct: 416 KEAITQW 422


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 158 CDESIIISSQYDEIMLMFLEKNIHI 232
           C E++ +    D  +L+  + NIHI
Sbjct: 390 CQEAMHMLKNADSQLLVISDDNIHI 414


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 183 DEIMIDSSQYEHQITKHAIDQIPRVSR 103
           D+   ++ Q E  ITK   D+I R+ R
Sbjct: 32  DDENCETLQSEVHITKDEYDEIGRLKR 58


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 183 DEIMIDSSQYEHQITKHAIDQIPRVSR 103
           D+   ++ Q E  ITK   D+I R+ R
Sbjct: 32  DDENCETLQSEVHITKDEYDEIGRLKR 58


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 321 KLCALYKSKTVSNFSLMHICICI 253
           K C + K   +S  S + +C+C+
Sbjct: 85  KYCGIGKECELSPNSTIAVCVCM 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,884
Number of Sequences: 438
Number of extensions: 2033
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)