Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24p24
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 285 2e-77
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 282 2e-76
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 268 2e-72
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 177 4e-45
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 142 2e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 140 7e-34
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 138 4e-33
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 136 1e-32
03_01_0034 + 318432-318825,318902-319851 136 1e-32
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 135 3e-32
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 134 5e-32
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 126 1e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 104 6e-23
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.67
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 31 0.89
09_02_0196 - 5678744-5679222,5679304-5679937 29 2.7
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.7
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 28 4.7
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.7
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 28 6.2
07_01_0284 - 2082249-2082256,2082496-2083009 28 6.2
05_03_0130 - 8770354-8770678,8770799-8770992,8771091-8771203,877... 28 6.2
04_04_1320 - 32623378-32623949,32624035-32624451,32624548-326248... 27 8.2
04_04_0730 + 27618981-27619143,27619237-27619349,27619695-276198... 27 8.2
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 27 8.2
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 285 bits (699), Expect = 2e-77
Identities = 124/139 (89%), Positives = 134/139 (96%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMP DKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RVRKLADQCTGLQGFLIFH 514
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 282 bits (691), Expect = 2e-76
Identities = 123/139 (88%), Positives = 133/139 (95%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRECISIH GQAG+Q+GNACWELYCLEHGIQ DGQMPSD+TVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RVRKLADQCTGLQGFLIFH 514
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 268 bits (657), Expect = 2e-72
Identities = 117/139 (84%), Positives = 130/139 (93%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAG+Q+GNACWELYCLEHGI+PDG MPSD TVG D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRA+F+DLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 RVRKLADQCTGLQGFLIFH 514
RVRKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 177 bits (432), Expect = 4e-45
Identities = 78/102 (76%), Positives = 92/102 (90%)
Frame = +2
Query: 209 SDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE 388
SD T G D+FNTFFSET +GKHVPRA+F+DLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 389 DAANNYARGHYTIGKEIVDLVLDRVRKLADQCTGLQGFLIFH 514
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFN 199
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSD 214
MRE ISIH GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 142 bits (343), Expect = 2e-34
Identities = 66/140 (47%), Positives = 88/140 (62%)
Frame = +2
Query: 95 KMRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAG 274
KMRE + I GQ G QIG+ WE+ C EHGI P G+ + + N +++E G
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCG 237
Query: 275 KHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 454
+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 238 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Query: 455 DRVRKLADQCTGLQGFLIFH 514
D VRK A+ C LQGF + H
Sbjct: 298 DVVRKEAENCDCLQGFQVCH 317
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 140 bits (339), Expect = 7e-34
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DSFNTFFSETG 268
MRE + I GQ G QIG+ WE+ C EHGI P G+ VG D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 269 AGKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 448
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 449 VLDRVRKLADQCTGLQGFLIFH 514
VLD VRK A+ C LQGF + H
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCH 137
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 138 bits (333), Expect = 4e-33
Identities = 64/139 (46%), Positives = 87/139 (62%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RVRKLADQCTGLQGFLIFH 514
VRK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 136 bits (329), Expect = 1e-32
Identities = 62/139 (44%), Positives = 87/139 (62%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RVRKLADQCTGLQGFLIFH 514
VRK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 136 bits (329), Expect = 1e-32
Identities = 63/139 (45%), Positives = 85/139 (61%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 458 RVRKLADQCTGLQGFLIFH 514
VRK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 135 bits (326), Expect = 3e-32
Identities = 63/139 (45%), Positives = 86/139 (61%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RVRKLADQCTGLQGFLIFH 514
VRK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 134 bits (324), Expect = 5e-32
Identities = 63/134 (47%), Positives = 84/134 (62%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RVRKLADQCTGLQG 499
VRK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 126 bits (304), Expect = 1e-29
Identities = 60/133 (45%), Positives = 80/133 (60%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RVRKLADQCTGLQ 496
VRK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 104 bits (249), Expect = 6e-23
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
RE I+I GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 454
+PRA+ +DLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 455 DRVRKLADQCTGLQGFLIFH 514
D + + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 237 SSPPPTVLSEGICPSGWMPCSRQYSSQ 157
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 204 CPRTKPSAAETIPSTHSSAKQEPVNMFL 287
C TKP A+E S+ S +K++PV +L
Sbjct: 66 CEETKPDASEETSSSESGSKKKPVKRYL 93
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 29.1 bits (62), Expect = 2.7
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 141 CTPAWPAWIDMHSRI 97
C P W AW+++H+R+
Sbjct: 33 CGPVWEAWVEVHTRV 47
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 231 PPPTVLSEGICPSGWMPCSR 172
P P LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -2
Query: 180 CSRQYSSQ-HALPICTPAWPAWIDMHSRILFYFNINSSNYTNFYFEKTLLQL 28
C R+ HAL C A W+ MH ++ S + NF+ L +L
Sbjct: 1484 CDREKEDAGHALCCCVHANSLWVSMHKSGSISLDVKSIQFDNFWLFDCLEKL 1535
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 225 PTVLSEGICPSGWMPCSRQYSSQ 157
P LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 9 SNLDDNPVGAAFSQNKSSCNLKN*Y*NKTKCVSAYLSTRARLVCKSATRVGSCIVSNMAS 188
++LD +P G F+ S N+K K C+ Y R+ T G IVS +
Sbjct: 110 ASLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDGRWIVSGGSD 169
Query: 189 N 191
N
Sbjct: 170 N 170
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -2
Query: 270 APVSLKNVLKESSPPPTVLSEGICPSGWMPCSRQYSSQHALPI 142
+P+ K E PPP+ + I W P + ++Q +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>05_03_0130 -
8770354-8770678,8770799-8770992,8771091-8771203,
8771320-8771482
Length = 264
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 285 GTCLPAPVSLKNVLKESSPPPTVLSEGICPSGWMP 181
G L AP+S++ SS T+++ + PSGW P
Sbjct: 223 GAALQAPLSIRLT---SSSGKTLVASNVIPSGWKP 254
>04_04_1320 -
32623378-32623949,32624035-32624451,32624548-32624895,
32625671-32625768,32625882-32626051,32627134-32627418,
32628041-32628119,32628481-32628623,32629227-32629634
Length = 839
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 135 VCKSATRVGSCIVSNMASNQTGRCPRTKPSAA 230
V ++ T V +C SN + G C RTK SAA
Sbjct: 23 VARAQTPVFACDASNATVSGYGFCDRTKSSAA 54
>04_04_0730 +
27618981-27619143,27619237-27619349,27619695-27619888,
27620141-27620465
Length = 264
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 285 GTCLPAPVSLKNVLKESSPPPTVLSEGICPSGWMP 181
G+ L AP S++ SS T+++ + PSGW P
Sbjct: 223 GSALQAPFSIRLT---SSSGKTLVASNVIPSGWKP 254
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 234 SPPPTVLSEGICPSGWMPCSRQYSSQ 157
+P P LS + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,739,020
Number of Sequences: 37544
Number of extensions: 374462
Number of successful extensions: 1359
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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