Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24p23
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030783-1|AAH30783.1|  828|Homo sapiens glycerol-3-phosphate ac...    30   7.3  
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    30   7.3  

>BC030783-1|AAH30783.1|  828|Homo sapiens glycerol-3-phosphate
           acyltransferase, mitochondrial protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -2

Query: 606 TISRCFPLVWLRPRLSTSRSFIVNATFSCYISIPCNWPTVFNTS 475
           TI R   L W    +S  R F+    +SC    P +W   FNTS
Sbjct: 42  TIFRSATLKWKESLMSRKRPFVGRCCYSC---TPQSWDKFFNTS 82


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -1

Query: 580 VVAASVVHIEVFYCKCYFQLLHIHTLQLAYSFQYLVAVLTFCR 452
           V   + +H +V+ C C    +H H     Y++ Y+  +  +CR
Sbjct: 241 VCTHAYIHTQVYVCVCTHAYIHTHVCVCVYTYTYMYTL--WCR 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,124,179
Number of Sequences: 237096
Number of extensions: 1383416
Number of successful extensions: 2487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2486
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)