Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24p23
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    24   1.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   3.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.1  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 253 FFLTNVLMILFYFVTP 206
           FF  +V++I  YFVTP
Sbjct: 9   FFFLSVILITSYFVTP 24


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 466 VLPRGIENCRPIARYGYVTAESSIYNK 546
           +LPRG +   P   + YV+  SS YN+
Sbjct: 605 LLPRGKKEGMPFQLFLYVSPVSSEYNQ 631


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 466 VLPRGIENCRPIARYGYVTAESSIYNK 546
           +LPRG +   P   + YV+  SS YN+
Sbjct: 605 LLPRGKKEGMPFQLFLYVSPVSSEYNQ 631


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 127 YKRFKWYGITYNLKL 83
           YK  K YG+T NL++
Sbjct: 90  YKNIKLYGLTKNLEI 104


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 268 KSFMFFFLTNVLMILFYF 215
           K++ FFF+  + +I  YF
Sbjct: 3   KNYHFFFILVITLIFLYF 20


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 604 NKPLFPSGVVAASVVHIEVFYCKCYFQLLHIHTL 503
           N+P   + + +  +V  ++ + K  F  LH HT+
Sbjct: 229 NRPTPAADIYSLGIVAWQMLFRKLPFAGLHSHTI 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,411
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)