Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24p21
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0217 + 1848970-1849251,1849419-1849566,1849638-1849789,185... 86 3e-17
02_05_1316 - 35679456-35679538,35679660-35679722,35679824-356799... 36 0.022
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841... 34 0.12
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 31 0.64
01_06_0799 - 32072656-32072841,32072846-32072950,32073726-320738... 30 1.5
03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348... 29 3.4
01_05_0380 - 21633505-21634563,21634626-21634677,21636263-216363... 29 3.4
01_07_0331 + 42804385-42804659,42806175-42806340,42806424-428065... 29 4.5
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 28 6.0
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 28 6.0
05_06_0056 + 25246631-25246913,25247047-25247141,25247593-252476... 28 6.0
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 28 6.0
>01_01_0217 +
1848970-1849251,1849419-1849566,1849638-1849789,
1850146-1850328,1850690-1850765,1850956-1851033,
1851584-1851669,1852680-1852753,1852920-1852965,
1853211-1853320,1853600-1853774,1854501-1854749
Length = 552
Score = 85.8 bits (203), Expect = 3e-17
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Frame = +1
Query: 7 HHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKV 186
HHDHV G+ ++ + + ++ HK + SI + G+ I + ++V
Sbjct: 275 HHDHVDGL-SVVQRCNPDAVLLTHKNTMSRIGKGNW--SIGYTAVAGGENICIGDQQLQV 331
Query: 187 HHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFED-----LYTYMKSLQKILDLKPNI 351
PGHT H+ + + N L GD +G+G+A ++ + Y ++ LD+ P++
Sbjct: 332 VFAPGHTDGHMGVLHVNTNALIVGDHCVGQGSATLDNRAGGNMKDYFQTTYNFLDMSPHV 391
Query: 352 IYPGHGNIVKEPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDLVKIIYTETPEHLW 531
+ P HG I P + Y+ HR RE IL++++ N + L D+V Y + LW
Sbjct: 392 LIPMHGRINLWPKHMLCGYLRHRRAREVSILQSIE-NGARTL--FDIVSKTYADVDRKLW 448
Query: 532 PAAAYNVNHHLTKLVKECKV 591
A++NV H+ L + K+
Sbjct: 449 IPASFNVRLHVDHLNSQNKL 468
>02_05_1316 -
35679456-35679538,35679660-35679722,35679824-35679938,
35680271-35680372,35680667-35680736,35681182-35681273,
35681542-35681622,35681697-35681740,35681829-35681976
Length = 265
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +1
Query: 130 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLY-T 306
+EW G GA ++ HTPGHT + L LF+GD + + DL+
Sbjct: 153 VEWKLTGNGPWDIGADFELIHTPGHTEGSVCLFYKPVKALFTGDHVAKSEESDDLDLFLM 212
Query: 307 YMK--------SLQKILDLKPNIIYPGHG 369
Y K S++K+L L PGHG
Sbjct: 213 YSKQSVGLQLDSMRKLLKLDFEWFLPGHG 241
>02_05_1317 -
35683659-35683756,35683904-35683966,35684068-35684182,
35684385-35684486,35684687-35684756,35684878-35684952,
35685188-35685279,35685386-35685493,35685560-35685640,
35685728-35685771,35685858-35685984
Length = 324
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Frame = +1
Query: 169 GATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTY-----------MK 315
GA ++ HTPGHT + L LF+GD + + +DLY + +
Sbjct: 220 GADFELIHTPGHTQGSVCLFYKPVKALFTGDHVAKSEES--DDLYLFLMYSRQPVSLQLD 277
Query: 316 SLQKILDLKPNIIYPGHG 369
S++K+L L PGHG
Sbjct: 278 SMRKLLKLDFEWFLPGHG 295
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 361 GHGNIVKEPVEKIEYYIAHRNQREEQIL-EALKTNSDKNLN---EMDLVKIIYTE 513
GH N+V++ + Y +H ++++Q E N+D LN E+D++K I E
Sbjct: 885 GHPNVVEKFSSALNQYDSHAPEKKDQCFQEGFMINTDDILNLQLELDIIKTILAE 939
>01_06_0799 -
32072656-32072841,32072846-32072950,32073726-32073839,
32073935-32073996,32074709-32074745,32075091-32075179,
32075331-32075604
Length = 288
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 376 VKEPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEM 486
+K PV IE+Y+ R+Q E+QI + +SDK L ++
Sbjct: 132 MKVPVAAIEFYLDTRSQIEDQIRGFSEPSSDKLLPDL 168
>03_02_0896 -
12233706-12233801,12234005-12234181,12234741-12234854,
12234928-12235006,12235372-12235533,12235957-12236079,
12236139-12236218
Length = 276
Score = 29.1 bits (62), Expect = 3.4
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Frame = +1
Query: 7 HHDHVGGVENIYKTIAKNPIIW---KHKKSSEDSADNELPASIPIEWLRDGQEIKVEGAT 177
H DH GG E + +++ + + K D +N S+ G++I++
Sbjct: 67 HWDHAGGNEKMAQSVPGIKVYGGSLDNVKGCTDQVENGTKLSL-------GKDIEILCLH 119
Query: 178 VKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTA-VFEDLYTYM-KSLQKILDL--KP 345
H T GH + ++ E+ +F+GD + G FE M +SL L KP
Sbjct: 120 TPCH-TKGHISYYVTSKEEEDPAVFTGDTLFIAGCGRFFEGTAEQMYQSLCVTLGSLPKP 178
Query: 346 NIIYPGHGNIVKEPVEKIEYYIAHRNQREEQILEALKTNSDKN 474
+Y GH VK K + N++ +Q LE + + N
Sbjct: 179 TQVYCGHEYTVKN--LKFILTVEPDNEKVKQKLEWAQKQREAN 219
>01_05_0380 -
21633505-21634563,21634626-21634677,21636263-21636310,
21636349-21637289,21638737-21638982
Length = 781
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +1
Query: 292 EDLYTYMKSLQKILDLKPNIIYPGH---GNIVKEPVEKIEYYIAHRNQREEQILEALKTN 462
++LY K +QK++ P+++ G GN + +K +A N + + +L A +
Sbjct: 444 QNLYLTYKQVQKLIAASPHVLIEGDPCLGNALLASKKK----MAEENLKAQPVLVATNDD 499
Query: 463 SDKNLNEMDLVKIIYTETPEHLWPAAAYNVNHHLTKLVKECK 588
+L E +L K E P A + +H T + K
Sbjct: 500 VQPSLQEPELSKENSEENPPSPRDTAPVSGHHDQTAKIGASK 541
>01_07_0331 +
42804385-42804659,42806175-42806340,42806424-42806549,
42807142-42807207,42807645-42807698,42808843-42809019,
42809100-42809102
Length = 288
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 493 VKIIYT-ETPEHLWPAAAYNVNHHLTKLVKECKVKCVNNDGENRWQ 627
++ I+T T E W + YN HH +KLV C N E +W+
Sbjct: 78 IRPIHTFSTVEDFW--SLYNNIHHPSKLVVGADFHCFKNKIEPKWE 121
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 172 ATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTA 285
+T V H HT D + C + +L SG CI+ G A
Sbjct: 564 STGDVSHK-SHTEDQVNAVCQKNVVLSSGTCIISNGFA 600
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 295 DLYTYMKSLQKILDLKPNIIYPGHGNIVKEPVEKI 399
D+Y++ L +++ +P II PGHG+IV+ +KI
Sbjct: 725 DVYSFGVVLLEVVTGEPPII-PGHGHIVQRVKQKI 758
>05_06_0056 +
25246631-25246913,25247047-25247141,25247593-25247629,
25248158-25248219,25248305-25248418,25249248-25249352,
25249441-25249539,25250203-25250359,25250473-25250579
Length = 352
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 364 HGNIVKEPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMD 489
+ +K PV IE+Y+ R+ E+ I + SDK L ++D
Sbjct: 133 YSTAMKAPVAAIEFYMDVRHTIEDHIRGFAEPTSDKLLPDLD 174
>02_03_0390 +
18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 529 WPAAAYNVNHHLTKLVKECKVKCVNNDGENRWQY 630
WP HH K+ +E +C NN GE R ++
Sbjct: 422 WPFLEKRAAHHGIKMNEEIGFQCDNNQGECRAKF 455
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,453,915
Number of Sequences: 37544
Number of extensions: 351629
Number of successful extensions: 650
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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