Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24p19
         (181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    26   4.1  
U41033-1|AAA82372.1|  317|Caenorhabditis elegans Hypothetical pr...    26   4.1  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       26   4.1  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       26   4.1  
Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    25   9.4  

>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 75  YPTSRVRCNENNILKRKPICFGK 7
           Y T    C E N+L R  +C+ K
Sbjct: 374 YDTCTTMCEETNVLTRAEVCWDK 396


>U41033-1|AAA82372.1|  317|Caenorhabditis elegans Hypothetical
           protein K09E3.5 protein.
          Length = 317

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 18  RWVFFSRYCFHYNVL*KLDSK 80
           +W+FF  + ++YN L K +S+
Sbjct: 112 QWIFFPYFRYYYNTLGKFESE 132


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 75  YPTSRVRCNENNILKRKPICFGK 7
           Y T    C E N+L R  +C+ K
Sbjct: 374 YDTCTTMCEETNVLTRAEVCWDK 396


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 75  YPTSRVRCNENNILKRKPICFGK 7
           Y T    C E N+L R  +C+ K
Sbjct: 374 YDTCTTMCEETNVLTRAEVCWDK 396


>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
          protein F59F5.7 protein.
          Length = 896

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 2  FLFPKQMGFLFKILFSLQRTLEV 70
          F F K   FLF ILF L  T+E+
Sbjct: 4  FYFSKANDFLFMILFLLIYTVEI 26


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
          protein F59F5.7 protein.
          Length = 896

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 2  FLFPKQMGFLFKILFSLQRTLEV 70
          F F K   FLF ILF L  T+E+
Sbjct: 4  FYFSKANDFLFMILFLLIYTVEI 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,482,360
Number of Sequences: 27780
Number of extensions: 43374
Number of successful extensions: 94
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)