Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24p18
(395 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB... 54 5e-08
AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA... 54 5e-08
M25292-1|AAA17840.1| 397|Drosophila melanogaster dsx protein. 29 1.7
BT029258-1|ABK30895.1| 427|Drosophila melanogaster FI01107p pro... 29 1.7
AY060257-1|AAL25296.1| 427|Drosophila melanogaster GH08308p pro... 29 1.7
AE014297-676|AAF54168.2| 427|Drosophila melanogaster CG11094-PC... 29 1.7
AE014297-675|AAN13385.1| 427|Drosophila melanogaster CG11094-PB... 29 1.7
AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA... 29 1.7
DQ138878-1|ABA86484.1| 939|Drosophila melanogaster CG17075 prot... 29 3.0
AE014134-68|AAF51524.1| 968|Drosophila melanogaster CG17075-PA ... 29 3.0
BT001480-1|AAN71235.1| 339|Drosophila melanogaster LD21829p pro... 28 3.9
AE014297-78|AAF52132.1| 339|Drosophila melanogaster CG9853-PA p... 28 3.9
>AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB,
isoform B protein.
Length = 872
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 32 KSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREICN 166
+ CLA + E ARKAAR+LFA LSNG ++IT QLER++R I N
Sbjct: 125 RRCLAMTPGERAARKAARELFACLSNGNEHITPKQLERKMRRIYN 169
>AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA,
isoform A protein.
Length = 853
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 32 KSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREICN 166
+ CLA + E ARKAAR+LFA LSNG ++IT QLER++R I N
Sbjct: 106 RRCLAMTPGERAARKAARELFACLSNGNEHITPKQLERKMRRIYN 150
>M25292-1|AAA17840.1| 397|Drosophila melanogaster dsx protein.
Length = 397
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>BT029258-1|ABK30895.1| 427|Drosophila melanogaster FI01107p
protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>AY060257-1|AAL25296.1| 427|Drosophila melanogaster GH08308p
protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>AE014297-676|AAF54168.2| 427|Drosophila melanogaster CG11094-PC,
isoform C protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>AE014297-675|AAN13385.1| 427|Drosophila melanogaster CG11094-PB,
isoform B protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA,
isoform A protein.
Length = 549
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 335 LRGHVRYAAFHYCLCDR 285
L+GH RY F YC C++
Sbjct: 56 LKGHKRYCKFRYCTCEK 72
>DQ138878-1|ABA86484.1| 939|Drosophila melanogaster CG17075
protein.
Length = 939
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +2
Query: 275 LQAGDHIN-----SNGTLRT--SHDLEEDVPDRCSNEEIRNLTVDNL 394
+++GD IN SNGT+ H EEDV +EE N+T+ L
Sbjct: 281 IESGDFINITLSLSNGTMMLIEQHTSEEDVHQEMWDEEQANMTISTL 327
>AE014134-68|AAF51524.1| 968|Drosophila melanogaster CG17075-PA
protein.
Length = 968
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +2
Query: 275 LQAGDHIN-----SNGTLRT--SHDLEEDVPDRCSNEEIRNLTVDNL 394
+++GD IN SNGT+ H EEDV +EE N+T+ L
Sbjct: 288 IESGDFINITLSLSNGTMMLIEQHTSEEDVHQEMWDEEQANMTISTL 334
>BT001480-1|AAN71235.1| 339|Drosophila melanogaster LD21829p
protein.
Length = 339
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 365 LHSNICQVHLLRGHVRYAAFHYCLC-DRQLVGQMVLMLVRHR 243
LH I V G++ A HY LC D L G++++ + + R
Sbjct: 148 LHKLIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSR 189
>AE014297-78|AAF52132.1| 339|Drosophila melanogaster CG9853-PA
protein.
Length = 339
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 365 LHSNICQVHLLRGHVRYAAFHYCLC-DRQLVGQMVLMLVRHR 243
LH I V G++ A HY LC D L G++++ + + R
Sbjct: 148 LHKLIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSR 189
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,284
Number of Sequences: 53049
Number of extensions: 266582
Number of successful extensions: 683
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -