Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24p17
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 32 0.26
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 2.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 3.2
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 28 4.2
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 28 5.6
Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.4
U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 7.4
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 27 9.8
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 27 9.8
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 27 9.8
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 27 9.8
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 27 9.8
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 234 PIAHPPCTPSASCTPIRCHPTPPSCQNPEKCLKKTTSKGVRPCRSAVSIMST 389
P P TP S P P PPS P++ +TT+ VRP +S T
Sbjct: 575 PFGEGPATPPRSLIPAHNFP-PPSTFPPDEDYHETTTDTVRPTAQTISTRFT 625
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 282 RCH--PTPPSCQNPEKCLKKTTSKGVRPCRSAVSIMST 389
+CH P PP N + TSKGV PC + IM T
Sbjct: 512 KCHEGPCPPCNLNTSVICRCGTSKGVIPCDEYLQIMKT 549
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 231 SPIAHPPCTPSASCTPIRCHPTPPSCQNP 317
SP+ PP P PI C P PP+C P
Sbjct: 247 SPVCMPPPPPPCPM-PIPCPPPPPACSCP 274
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 225 IMSPIAHPPCTPSASCTPIRCHPTPPSCQNPE 320
+ SP+ HPP P C P P PS + P+
Sbjct: 249 VQSPLTHPPVAPMPRCPP-PLPPRTPSMKLPD 279
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 225 IMSPIAHPPCTPSASCTPIRCHPTPPSCQNPE 320
+ SP+ HPP P C P P PS + P+
Sbjct: 249 VQSPLTHPPVAPMPRCPP-PLPPRTPSMKLPD 279
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 225 IMSPIAHPPCTPSASCTPIRCHPTPPSCQNPEKCLKK 335
+ +P PP P+A C C P PP +P C K+
Sbjct: 105 VPAPCCPPPPAPAAPC----CPPPPPPTPSPLVCCKQ 137
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
protein F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 231 SPIAHPPCTPSASCTPIRCHPTPP 302
+P+ PP P+A PI PTPP
Sbjct: 624 TPVTMPPRAPTAKPLPIPSAPTPP 647
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 237 IAHPPCTPSASCTPIRCHPTPPSCQNPEKCLKKTTSKGV 353
+A PC SA+ TPIR P + P K L + ++ V
Sbjct: 107 VAVKPCLKSATKTPIRVRPADGAMIPPRKSLTQQAAQRV 145
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 105 TIVSFPRSFFFQNIFSDIFYVTLKIY 28
TI +F S F+N F DI + +LK+Y
Sbjct: 130 TIYAFLHSHMFENDFRDILHSSLKMY 155
>Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical
protein F44G3.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 334 KQLRKEFDLVGVLYP*CQQGQKPNVLVAGN 423
K L F ++G++Y C KPNV ++ N
Sbjct: 44 KYLMFSFSVLGIIYSCCDFWSKPNVYISKN 73
>U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical
protein F59A6.10 protein.
Length = 155
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 234 PIAHPPCTPSASCTPIRCHP-TPPSCQNPEKCLKKTTSKGVRPC 362
P PPC +C P+ + C P+ C+++ VRPC
Sbjct: 40 PCVKPPCRTILACLPVEANGCARMECSAPKVCVER-----VRPC 78
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 301 GGVG*HRMGVHDADGVHGGCA 239
GG G HR G H G HG C+
Sbjct: 275 GGSGHHRGGRHGGHGRHGSCS 295
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 258 PSASCTPIRCHPTPPSCQNPEKCLKKTTSKGVRP 359
P+A + P PP C +PE+C GV P
Sbjct: 8 PNAFMSAEETAPPPPPCISPEECNATVNEWGVWP 41
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 95 ETIVTIHDLP*NLYLWCKILKSAEYLGPLRYANI 196
+TI+ I P L+ CK + +L PLR AN+
Sbjct: 123 KTIIGITKAPGELHFLCKFSDDSVHLIPLREANV 156
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQN 314
PP P P+ P PPS +N
Sbjct: 1418 PPTLPPVQSVPVSSKPAPPSAEN 1440
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQN 314
PP P P+ P PPS +N
Sbjct: 1418 PPTLPPVQSVPVSSKPAPPSAEN 1440
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQN 314
PP P P+ P PPS +N
Sbjct: 1440 PPTLPPVQSVPVSSKPAPPSAEN 1462
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +3
Query: 162 RNTWGLCDTLT*HEQVLLNAAIMSPIAHPPCTPSASCTPIRCHPTPPSCQNP 317
R G C T ++ A + P+ P C P C P + P PP C P
Sbjct: 24 RGGCGGCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPC-PAQFCPPPPICPPP 74
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQNPEKCLKKTTSKGVRPCRS 368
PP TP CTP+ PP K ++ + P ++
Sbjct: 592 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKN 632
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQNPEKCLKKTTSKGVRPCRS 368
PP TP CTP+ PP K ++ + P ++
Sbjct: 609 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKN 649
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +3
Query: 246 PPCTPSASCTPIRCHPTPPSCQNPEKCLKKTTSKGVRPCRS 368
PP TP CTP+ PP K ++ + P ++
Sbjct: 721 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKN 761
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 95 ETIVTIHDLP*NLYLWCKILKSAEYLGPLRYANI 196
+TI+ I P L+ CK + +L PLR AN+
Sbjct: 123 KTIIGITKAPGELHFLCKFSDDSVHLIPLREANV 156
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 285 CHPTPPSCQNPEKCLKKTTSKGVRPCRS 368
C P P C + +C+K TT K C S
Sbjct: 1202 CLPGPDMCSDGYECVKSTTHKSKNICCS 1229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,238,934
Number of Sequences: 27780
Number of extensions: 252328
Number of successful extensions: 927
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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