Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24p16
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    28   0.066
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    28   0.066
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    26   0.27 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    26   0.27 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   4.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   5.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.6  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 484 RPSHISLNVPPQKWTACRNFLSKF 413
           R  H  L++ P+K   CR++LSKF
Sbjct: 385 RMQHCELHMQPRKKNCCRSWLSKF 408


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 484 RPSHISLNVPPQKWTACRNFLSKF 413
           R  H  L++ P+K   CR++LSKF
Sbjct: 385 RMQHCELHMQPRKKNCCRSWLSKF 408


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 127 HWTNGYAASSIDTHVLQGIKCRQEKPTDLRYQTQNTFNVGN 249
           HW+ G    S+D   +       + P D++  T +  N GN
Sbjct: 22  HWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGN 62


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 127 HWTNGYAASSIDTHVLQGIKCRQEKPTDLRYQTQNTFNVGN 249
           HW+ G    S+D   +       + P D++  T +  N GN
Sbjct: 22  HWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGN 62


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 82  NFGDSYNTENTYIDNHWTNGY 144
           N+ ++YN  N Y +N++ N Y
Sbjct: 329 NYNNNYNNYNNY-NNNYNNNY 348


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 214 RYQTQNTFNVGNIINKCSENKRY-KSNNVMKHKKLSSKMKASSFSYRAPKCS 366
           + + Q+T  V NI     E+K+Y  S+N ++++    +  +S +S R   CS
Sbjct: 188 KIEEQDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYS-RERSCS 238


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +1

Query: 190 RQEKPTDLRYQTQNTF-NVGNIINKCSENKRYKSNNVMKHKKL 315
           R  +P  +   +  T  N  N  N    N  Y +NN   +KKL
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKL 117


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -1

Query: 218 YLKSVGFSCLHLIPCKTCVS------IELAAYPL 135
           YL++     L LIP  TC++      IEL+ Y L
Sbjct: 380 YLRACITESLRLIPTTTCIARILDEPIELSGYRL 413


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 333 CFHFTRQFLVLHYIITFISFVFRT 262
           C + TRQ L LHY      FV+ T
Sbjct: 121 CENETRQGLTLHYRSKRRGFVYYT 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,730
Number of Sequences: 438
Number of extensions: 4187
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)